Factsheet for TraesCS1A01G125600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, peroxisome
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G127900.1	Wheat	cytosol, golgi, peroxisome	98.67	98.67
TraesCS1B01G144600.1	Wheat	cytosol, golgi, peroxisome	97.87	97.87
HORVU1Hr1G029110.2	Barley	cytosol, plasma membrane, plastid	97.07	81.29
EES19194	Sorghum	golgi, peroxisome, plastid	79.52	79.73
Zm00001d009997_P001	Maize	plasma membrane	78.99	79.2
Os05t0199500-01	Rice	mitochondrion	78.46	75.64
CDY42221	Canola	cytosol	21.28	61.54
VIT_13s0158g00110.t01	Wine grape	cytosol	14.1	57.61
GSMUA_Achr6P05430_001	Banana	endoplasmic reticulum, nucleus, plastid	53.46	53.46
VIT_04s0008g01270.t01	Wine grape	plastid	50.8	52.91
Bra034289.1-P	Field mustard	plastid	48.4	50.14
CDY35316	Canola	plastid	48.4	50.14
CDX77030	Canola	plastid	48.14	49.86
AT2G26100.1	Thale cress	plastid	48.67	49.33
TraesCS7A01G115200.1	Wheat	plastid	44.68	46.28
TraesCS7A01G293200.1	Wheat	mitochondrion	25.27	27.54
TraesCS6A01G201400.2	Wheat	golgi	28.19	26.7
TraesCS1A01G267200.1	Wheat	golgi	28.46	26.68
TraesCS3A01G389200.1	Wheat	golgi, mitochondrion	27.93	26.05
TraesCS6A01G138100.1	Wheat	golgi	27.66	26.0
TraesCS7A01G139800.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	24.47	25.84
TraesCS7A01G330900.1	Wheat	cytosol, golgi, mitochondrion, plastid	27.39	25.75
TraesCS7A01G458600.1	Wheat	golgi	26.6	24.81
TraesCS5A01G235300.4	Wheat	golgi	27.66	24.47
TraesCS7A01G316500.2	Wheat	golgi, mitochondrion, plastid	25.8	23.72

Protein Annotations

MapMan:21.4.1.1.5.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150
GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740
GO:GO:0019538	InterPro:Glyco_trans_31	PFAM:PF01762	PANTHER:PTHR11214	PANTHER:PTHR11214:SF85	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS1A01G125600	EnsemblPlants:TraesCS1A01G125600.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1A:+:149864848..149874041

Molecular Weight (calculated)

41945.7 Da

IEP (calculated)

6.555

GRAVY (calculated)

-0.330

Length

376 amino acids

Sequence
(BLAST)

001: MPLHHPKHRH HHDEDVLPYH RSDDEAKPRR PYVPSSFPSS PASAASPHRF LLPFAVVCLL LAVASLSFAV SVSRRPVPLQ SPPDSVAFRC GRAEDSLRSF
101: LASSGNYSAG DREKVLAVVG VHTELGSAAR RAALRATWFP PNPEGVVSLE HGFGLSFRFV IGRTKDKEKM ADLQKEVDMY HDFLFIDADE GTKPPEKMLA
201: YFKAAYDMFH AEFYVKADDT IYLRPDRLAA LLAKDRLHHR TYIGCMKKGP VVSDPNMKWY ESSYGLLGNE YFMHASGSLY ALSSEVVGAI ATTNNDSLRM
301: FDYEDVTIGS WMLAMNVNHE DNRAMCDSTC TPSSIAVWDS KICSGSCNPI EKIKELHNTT LCSKSPTLPP EVEEEE

Best Arabidopsis Sequence Match ( AT2G26100.1 )
(BLAST)

001: MPLFSHRFTT ASSSSPASPS YYNKPSSKTH KPNSSSSSYT SSRIHVAIIF FSLVSVFIGV AGTIFALSST GPASVYRCGG SKDTSRVVSA SRKLGGDGGN
101: NGVVVERRKL LGFVGIQTGF DSGDRRTALR STWFPSDPDS LLRLEQATGL AFRFVIGKSK DAKKMAELEK EIKEYRDFVL LDTEEEYIRL PYKTLAFFKA
201: AFKLFEADYY VKADDDIYLR PDRLATLLAN ERLHSQTYIG CMKKGPVITD PKLKWYEKQG NLIGNEYFLH AYGPIYVLSA EIVASLAAAR NGSLRMFNNE
301: DVTIGSWMLA MDVHHEDNRA LCDPHCSPKS IAVWDIPKCS GLCDPESRLK ELHKTDMCSK SPTLPPDDID Q

Arabidopsis Description

B3GALT12Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178VU65]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.