Factsheet for TraesCS6D01G127200.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 2
golgi 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G166400.1	Wheat	golgi	100.0	100.0
TraesCS6A01G138100.1	Wheat	golgi	100.0	100.0
HORVU6Hr1G026680.2	Barley	golgi	98.75	98.75
Os02t0164300-02	Rice	cytosol	43.0	94.51
EES04570	Sorghum	golgi	88.75	88.31
Zm00001d053825_P002	Maize	golgi	88.5	88.06
TraesCS7D01G446600.1	Wheat	golgi	78.25	78.84
VIT_10s0116g01710.t01	Wine grape	cytosol	67.0	65.69
GSMUA_Achr5P00690_001	Banana	golgi	65.0	64.84
TraesCS7D01G339200.1	Wheat	cytosol, golgi, mitochondrion, plastid	64.25	64.25
GSMUA_Achr9P30290_001	Banana	cytosol	66.0	62.56
KRH02065	Soybean	golgi, mitochondrion	58.0	62.03
KRH51094	Soybean	cytosol	52.75	61.16
AT1G11730.1	Thale cress	golgi, mitochondrion	58.0	60.42
Bra019835.1-P	Field mustard	mitochondrion	57.75	59.08
CDY49800	Canola	mitochondrion	57.75	59.08
CDX97981	Canola	mitochondrion	57.25	58.57
TraesCS6D01G187900.1	Wheat	golgi	57.5	57.93
TraesCS5D01G242400.1	Wheat	golgi	57.0	57.72
TraesCS1D01G267300.1	Wheat	golgi	52.25	52.12
TraesCS7D01G313600.2	Wheat	golgi	47.5	48.97
TraesCS3D01G380700.1	Wheat	mitochondrion	48.75	47.68
TraesCS7D01G286500.1	Wheat	mitochondrion	32.0	37.1
TraesCS7D01G141100.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	30.75	34.75
TraesCS5D01G103000.1	Wheat	mitochondrion	12.75	32.69
TraesCS4D01G104700.2	Wheat	mitochondrion	12.5	32.05
TraesCS7D01G111900.1	Wheat	plastid	27.75	30.58
TraesCS1D01G127900.1	Wheat	cytosol, golgi, peroxisome	25.75	27.39

Protein Annotations

MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	InterPro:DUF4094	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_31
PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF120	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G127200
EnsemblPlants:TraesCS6D01G127200.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:91041697..91045277

Molecular Weight (calculated)

45039.6 Da

IEP (calculated)

7.895

GRAVY (calculated)

-0.414

Length

400 amino acids

Sequence
(BLAST)

001: MSWRKAGGDG GVSKRWAVLL CLGSFCLGLL FTNRMWTLPE ATEVPLPNQS VEEGKALVAA DCGSKKVQEL QKYKDVLPDQ DTHHDVQTLD KTIATLETEL
101: SAARTLQESL LNGSPVSEDF KVSESIGRRK YRMVIGINTA FSSRKRRDSI RYTWMPRGEK RKQLEEQKGV IIRFVIGHSA IAGGIIDRAI EAEDRKHGDF
201: MKIDHVEGYL ALSGKTKTYF ATAVSLWDAD FYVKVDDDVH VNIATLGQIL SKQAWKPRVY MGCMKSGPVL SEKGVRYYEP EHWKFGEPGN KYFRHATGQL
301: YAISKDLATY ISINKHVLHK YINEDVSLGS WFLGLDVEHI DDRRLCCGTP PDCEWKAQAG NTCAASFDWK CSGICNSEGR IWEVHNKCAE GDKALWNSTF

Best Arabidopsis Sequence Match ( AT1G05170.2 )
(BLAST)

001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF

Arabidopsis Description

B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
SUBAcon: [golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.