Factsheet for TraesCS7D01G313600.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
mitochondrion 3
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS7A01G316500.2	golgi
TraesCS7B01G217700.1	golgi
TraesCS7D01G313600.2	golgi

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32930.1	TraesCS7A01G316500.2	AT1G32930.1	24693939
AT1G32930.1	TraesCS7B01G217700.1	AT1G32930.1	24693939
AT1G32930.1	TraesCS7D01G313600.2	AT1G32930.1	24693939

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G010190.1	Barley	cytosol	20.36	97.53
TraesCS7B01G217700.1	Wheat	extracellular, golgi, peroxisome	95.62	90.93
TraesCS7A01G316500.2	Wheat	golgi, mitochondrion, plastid	95.1	90.22
Os08t0116900-01	Rice	golgi, mitochondrion	80.67	80.67
EES14424	Sorghum	golgi, mitochondrion	77.84	78.44
Zm00001d035090_P002	Maize	mitochondrion	71.65	62.19
Bra023296.1-P	Field mustard	golgi	55.15	54.73
CDX93812	Canola	golgi	54.9	54.48
VIT_02s0025g02830.t01	Wine grape	golgi	55.93	53.58
AT1G32930.1	Thale cress	golgi	54.64	53.13
TraesCS7D01G446600.1	Wheat	golgi	50.0	48.87
CDY54843	Canola	golgi	55.15	48.86
TraesCS6D01G187900.1	Wheat	golgi	49.74	48.61
TraesCS5D01G242400.1	Wheat	golgi	49.48	48.61
TraesCS7D01G339200.1	Wheat	cytosol, golgi, mitochondrion, plastid	50.0	48.5
TraesCS6D01G127200.1	Wheat	golgi	48.97	47.5
TraesCS1D01G267300.1	Wheat	golgi	47.16	45.64
TraesCS3D01G380700.1	Wheat	mitochondrion	47.16	44.74
TraesCS7D01G286500.1	Wheat	mitochondrion	31.7	35.65
TraesCS7D01G141100.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	28.61	31.36
TraesCS7D01G111900.1	Wheat	plastid	26.55	28.37
TraesCS5D01G103000.1	Wheat	mitochondrion	10.31	25.64
TraesCS4D01G104700.2	Wheat	mitochondrion	10.31	25.64
TraesCS1D01G127900.1	Wheat	cytosol, golgi, peroxisome	23.97	24.73

Protein Annotations

MapMan:21.4.1.1.5.3	InterPro:DUF4094	GO:GO:0000003	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975
GO:GO:0006464	GO:GO:0006486	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378
GO:GO:0009058	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0016020
GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_31	PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214
PANTHER:PTHR11214:SF123	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7D01G313600	EnsemblPlants:TraesCS7D01G313600.2	SEG:seg	:

Description

No Description!

Coordinates

chr7D:+:397382030..397385114

Molecular Weight (calculated)

43672.0 Da

IEP (calculated)

8.214

GRAVY (calculated)

-0.474

Length

388 amino acids

Sequence
(BLAST)

001: MAAARPHHRA PPGRVPTRCV AALCAACFLL GVCVVNRYWA VPEPPDCPSK ANSGRSRAVL SQAQTREVII ALDRTISDIE MRLAAARAAQ MRNQGVSPSD
101: SAADQGNMRP RLLFVMGIMT TFDNRRRRDS IRKTWMPQGR ACERLRMLEK DKGIVTRFVI GRSANPGPDS EVERAMDAEE KEYNDILRLN HVEGQDGLPL
201: KIQMFLSSAL STWDADFYVK VDDDVHVNIG ITRSILARHR SKPRVYIGCM KSGPVIANNE SKYYEPDHWK FGTAGNNYFR HATRQLYAIT RDLATYISAN
301: KHILHKYTNE DVSFGSWLIG LDVEHVDERS LCCGIPPDCE WKAQAGNPCG ASFDWNCSGV CNPAERMEEV HRRCWEHREA ALPQAQES

Best Arabidopsis Sequence Match ( AT1G05170.2 )
(BLAST)

001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF

Arabidopsis Description

B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
SUBAcon: [golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.