Factsheet for Bra023296.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
mitochondrion 2
golgi 4
plastid 2
extracellular 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra023296.1-P	golgi

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32930.1	Bra023296.1-P	AT1G32930.1	24693939

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93812	Canola	golgi	99.49	99.49
AT1G32930.1	Thale cress	golgi	93.61	91.73
CDY54843	Canola	golgi	99.74	89.04
VIT_02s0025g02830.t01	Wine grape	golgi	77.49	74.81
HORVU1Hr1G010190.1	Barley	cytosol	13.81	66.67
Bra015654.1-P	Field mustard	golgi	58.57	59.79
Bra010198.1-P	Field mustard	vacuole	58.31	57.87
Bra010422.1-P	Field mustard	cytosol, golgi	59.85	57.64
Bra031357.1-P	Field mustard	cytosol	49.1	57.48
Bra005595.1-P	Field mustard	golgi	60.1	57.46
Os08t0116900-01	Rice	golgi, mitochondrion	55.75	56.19
EES14424	Sorghum	golgi, mitochondrion	54.73	55.58
Bra019835.1-P	Field mustard	mitochondrion	55.5	55.5
Bra019081.1-P	Field mustard	cytosol	54.48	55.18
TraesCS7D01G313600.2	Wheat	golgi	54.73	55.15
Bra016393.1-P	Field mustard	golgi	53.2	53.33
Bra015395.1-P	Field mustard	plastid	57.54	52.82
TraesCS7B01G217700.1	Wheat	extracellular, golgi, peroxisome	53.96	51.72
Bra012302.1-P	Field mustard	golgi	52.43	51.64
TraesCS7A01G316500.2	Wheat	golgi, mitochondrion, plastid	53.96	51.59
Zm00001d035090_P002	Maize	mitochondrion	51.15	44.74
Bra003064.1-P	Field mustard	mitochondrion	34.02	39.94
Bra007804.1-P	Field mustard	plastid	33.25	37.57
Bra011324.1-P	Field mustard	plastid	32.74	36.78
Bra022647.1-P	Field mustard	mitochondrion	34.53	33.5
Bra001576.1-P	Field mustard	mitochondrion	26.85	30.7
Bra027291.1-P	Field mustard	mitochondrion	25.83	29.45
Bra034289.1-P	Field mustard	plastid	27.11	29.2
Bra038114.1-P	Field mustard	mitochondrion	25.83	29.02

Protein Annotations

MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	EnsemblPlantsGene:Bra023296	EnsemblPlants:Bra023296.1	EnsemblPlants:Bra023296.1-P	ncoils:Coil
InterPro:DUF4094	GO:GO:0000003	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464
GO:GO:0006486	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058
GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	InterPro:Glyco_trans_31	UniProt:M4E3E5	PFAM:PF01762
PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF123	TMHMM:TMhelix	UniParc:UPI0002542261	:

Description

AT1G32930 (E=3e-210) | galactosyltransferase family protein

Coordinates

chrA09:+:19832530..19834540

Molecular Weight (calculated)

43598.8 Da

IEP (calculated)

7.967

GRAVY (calculated)

-0.345

Length

391 amino acids

Sequence
(BLAST)

001: MGMGRHQKSG VPARWVIVLC ISSFLLGVLV INRLLATSET VDSNGRASSD QATSLHPLVD CQNKARDTLS RVSHTHDVIK TLDKTISSLE VELATARAAA
101: RSDGSPAVSK AVADQSKERP RMFFVMGIMT AFSSRKRRDS IRGTWLPKGD ELKRLETEKG IIMRFVIGHS SSPGGVLDHT IEAEEEQHKD FFRLNHIEGY
201: HELSSKTQIY FSSAVAKWDA DFYIKVDDDV HVNLGMLGST LARHRSKPRV YIGCMKSGPV LAQKGVKYHE PEYWKFGEEG NKYFRHATGQ IYAVSKDLAT
301: YISVNRQLLH KYANEDVSLG SWFIGLDVEH IDDRSLCCGT PLDCEWKGQA GNPCAASFDW SCSGICKSVD RMLEVHQRCG EGQGAIWHTS F

Best Arabidopsis Sequence Match ( AT1G32930.1 )
(BLAST)

001: MGMGRYQKSA TSGVSARWVF VLCISSFLLG VLVVNRLLAS FETVDGIERA SPEQNDQSRS LNPLVDCESK EGDILSRVSH THDVIKTLDK TISSLEVELA
101: TARAARSDGR DGSPAVAKTV ADQSKIRPRM FFVMGIMTAF SSRKRRDSIR GTWLPKGDEL KRLETEKGII MRFVIGHSSS PGGVLDHTIE AEEEQHKDFF
201: RLNHIEGYHE LSSKTQIYFS SAVAKWDADF YIKVDDDVHV NLGMLGSTLA RHRSKPRVYI GCMKSGPVLA QKGVKYHEPE YWKFGEEGNK YFRHATGQIY
301: AISKDLATYI SVNRQLLHKY ANEDVSLGSW FIGLDVEHID DRSLCCGTPL DCEWKGQAGN PCAASFDWSC SGICKSVDRM LEVHQRCGEG DGAIWHSSF

Arabidopsis Description

GALT31ABeta-1,6-galactosyltransferase GALT31A [Source:UniProtKB/Swiss-Prot;Acc:Q9MAP8]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.