Factsheet for GSMUA_Achr11P14940_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
mitochondrion 1
golgi 2
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P08420_001	Banana	cytosol	66.18	69.37
HORVU1Hr1G065460.2	Barley	golgi	64.49	66.58
Os01t0877400-01	Rice	golgi	65.46	66.42
TraesCS1D01G267300.1	Wheat	golgi	64.25	66.33
TraesCS1B01G278100.1	Wheat	golgi	64.01	66.08
TraesCS1A01G267200.1	Wheat	golgi	64.01	66.08
KXG22053	Sorghum	golgi, plastid	64.49	65.76
VIT_18s0089g01040.t01	Wine grape	endoplasmic reticulum, golgi	61.11	64.71
KRH40026	Soybean	golgi	59.66	64.66
KRH23776	Soybean	golgi, vacuole	58.94	64.55
TraesCS3A01G389200.1	Wheat	golgi, mitochondrion	62.32	64.02
Os05t0427200-01	Rice	cytosol, golgi, plastid	64.73	63.81
TraesCS3B01G419800.1	Wheat	golgi	62.08	63.3
TraesCS3D01G380700.1	Wheat	mitochondrion	62.32	63.08
Zm00001d012234_P002	Maize	mitochondrion	63.53	62.17
Solyc11g042810.1.1	Tomato	golgi	58.7	61.68
PGSC0003DMT400082760	Potato	golgi	59.18	61.56
Bra010198.1-P	Field mustard	vacuole	58.45	61.42
CDX73278	Canola	vacuole	58.45	61.42
CDY67379	Canola	vacuole	58.45	61.42
AT1G33430.2	Thale cress	golgi, vacuole	58.21	59.8
GSMUA_Achr5P23050_001	Banana	cytosol, golgi, mitochondrion, plastid	56.52	58.5
GSMUA_Achr5P00690_001	Banana	golgi	54.83	56.61
GSMUA_Achr8P23200_001	Banana	golgi	56.76	55.04
GSMUA_Achr4P33450_001	Banana	golgi	53.38	54.84
GSMUA_Achr4P23710_001	Banana	golgi	53.86	54.0
GSMUA_Achr7P00260_001	Banana	golgi	52.66	53.69
GSMUA_Achr9P30290_001	Banana	cytosol	52.17	51.18
OQU87975	Sorghum	cytosol	57.0	47.11
GSMUA_Achr4P00940_001	Banana	mitochondrion	33.57	41.25
GSMUA_Achr8P24200_001	Banana	cytosol	30.43	35.0
GSMUA_Achr7P14080_001	Banana	golgi, plastid	27.05	32.56
GSMUA_Achr10P...	Banana	mitochondrion	22.46	30.19
GSMUA_Achr6P05430_001	Banana	endoplasmic reticulum, nucleus, plastid	23.67	26.06

Protein Annotations

MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	InterPro:DUF4094	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975
GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr11G14940_001	EnsemblPlants:GSMUA_Achr11P14940_001	EnsemblPlants:GSMUA_Achr11T14940_001	InterPro:Glyco_trans_31	UniProt:M0RSC4	PFAM:PF01762
PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF100	TMHMM:TMhelix	UniParc:UPI000295F377	SEG:seg

Description

Probable beta-1,3-galactosyltransferase 8 [Source:GMGC_GENE;Acc:GSMUA_Achr11G14940_001]

Coordinates

chr11:+:16422229..16424207

Molecular Weight (calculated)

45690.2 Da

IEP (calculated)

8.873

GRAVY (calculated)

-0.381

Length

414 amino acids

Sequence
(BLAST)

001: MGGLVKAVSE RPQQPEKKPR GRPSPGRAVA VICFACFLVA FVFSRPVSFL PSEKKTRFVY SSSSSSSSSS SCESSLPRSS QDCESRTTSG KANPRDIIRE
101: VSKTHQAIRS LDKSISSLEM ELAVARMNSN GGSSSSGHGK GLKKAFAVIG INTGFGSKKR RESVRQTWMP RGTKLKRLEE EKSVVVRFVI GHSATPGGAL
201: DRAIDAEDAE TKDFLRLDHL EGYHELSSKT RVYFATAVAI WDADFYLKVD DDVHVNLGIL TTNLARYRGK SRVYMGCMKS GPVLFQTGVK YHEPEHWKFG
301: EEGNKYFRHA TGQIYAISKD LALYISTNAP ILHKYANEDV SLGSWLIGLE VEHIDDRSMC CGTPPDCEWK TRSGNVCVAS FDWSCSGVCK SVDRMKDVHK
401: SCGESDAAIW DVVL

Best Arabidopsis Sequence Match ( AT1G33430.1 )
(BLAST)

001: MRAKAASGKA IIVLCLASFL AGSLFMSRTL SRSYIPEEED HHLTKHLSKH LEIQKDCDEH KRKLIESKSR DIIGEVSRTH QAVKSLERTM STLEMELAAA
101: RTSDRSSEFW SERSAKNQSR LQKVFAVIGI NTAFSSKKRR DSVRQTWMPT GEKLKKIEKE KGIVVRFVIG HSATPGGVLD KAIDEEDSEH KDFLRLKHIE
201: GYHQLSTKTR LYFSTATAMY DAEFYVKVDD DVHVNLGMLV TTLARYQSRP RIYIGCMKSG PVLSQKGVKY HEPEFWKFGE EGNKYFRHAT GQIYAISKDL
301: ATYISTNQGI LHRYANEDVS LGAWMLGLEV EHVDERSMCC GTPPDCQWKA QAGNVCAASF DWSCSGICKS VDRMARVHRA CAEGDTPLAN FRFFV

Arabidopsis Description

Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:F4HR76]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.