CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 1
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G267300.1	Wheat	golgi	83.74	84.79
TraesCS1A01G267200.1	Wheat	golgi	83.5	84.54
TraesCS1B01G278100.1	Wheat	golgi	83.25	84.29
HORVU1Hr1G065460.2	Barley	golgi	83.25	84.29
Os05t0427200-01	Rice	cytosol, golgi, plastid	83.99	81.19
VIT_18s0089g01040.t01	Wine grape	endoplasmic reticulum, golgi	63.55	65.98
KRH40026	Soybean	golgi	62.07	65.97
KRH23776	Soybean	golgi, vacuole	61.33	65.87
GSMUA_Achr11P...	Banana	golgi	65.76	64.49
CDY67379	Canola	vacuole	61.08	62.94
Bra010198.1-P	Field mustard	vacuole	60.84	62.69
CDX73278	Canola	vacuole	60.84	62.69
Solyc11g042810.1.1	Tomato	golgi	60.59	62.44
PGSC0003DMT400082760	Potato	golgi	60.84	62.06
AT1G33430.2	Thale cress	golgi, vacuole	61.33	61.79
GSMUA_Achr8P08420_001	Banana	cytosol	60.1	61.77
OQU85173	Sorghum	golgi, nucleus	59.85	61.06
KXG35748	Sorghum	golgi	55.17	56.85
OQU87975	Sorghum	cytosol	67.98	55.09
EER91307	Sorghum	golgi, peroxisome, plasma membrane	55.42	55.01
EER88815	Sorghum	golgi	52.96	53.75
EES04570	Sorghum	golgi	52.96	53.48
EES14424	Sorghum	golgi, mitochondrion	48.77	51.43
EES13774	Sorghum	mitochondrion	34.24	40.17
EER87954	Sorghum	plastid	30.3	34.84
OQU75947	Sorghum	mitochondrion	31.28	34.7
KXG19339	Sorghum	golgi, mitochondrion, plastid	28.57	31.87
EES19194	Sorghum	golgi, peroxisome, plastid	25.12	27.2

Protein Annotations

MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	UniProt:A0A1B6P8R2	InterPro:DUF4094	GO:GO:0000139	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757
GO:GO:0019538	InterPro:Glyco_trans_31	EnsemblPlants:KXG22053	ProteinID:KXG22053	ProteinID:KXG22053.1	PFAM:PF01762
PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF100	EnsemblPlantsGene:SORBI_3009G146000	TMHMM:TMhelix	UniParc:UPI00081AC899
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:50300304..50303945

Molecular Weight (calculated)

44533.2 Da

IEP (calculated)

9.200

GRAVY (calculated)

-0.312

Length

406 amino acids

Sequence
(BLAST)

001: MALLTERQPQ PEKKAPRGAR PMSGKGVVVL CAASFFVGLL LSGRVTLLTP PSSNSPSGSR GSRIPLFSDG CDQKSRRKLD ESSPKDIMKE VSRTHLAIQS
101: LDKSVSSLEM ELAVERAKQN GGLGVSVPSR GGGLPKAFVV IGINTAFSSK KRRDSLRDTW VPRGDKLRRL EKEKGVVVRF VIGHSATPGG ALDRAIDVEA
201: SATADFLRLD HVEGYHELSA KTRTYFATAV ATWDADFYVK VDDDVHVNLG MLTSRLNKYR ARPRVYIGCM KSGPVLSQKG VKYYEQEYWK FGDEGNKYFR
301: HATGQIYAVS RDLASYISIN QPILHRFANE DVSLGAWLLG LEVEHVDDRS LCCATPPDCE WKKQAGNVCA ASFDWSCSGI CKSVDRMRAI HNACGEGDGA
401: IWSAAI

Best Arabidopsis Sequence Match ( AT1G33430.1 )
(BLAST)

001: MRAKAASGKA IIVLCLASFL AGSLFMSRTL SRSYIPEEED HHLTKHLSKH LEIQKDCDEH KRKLIESKSR DIIGEVSRTH QAVKSLERTM STLEMELAAA
101: RTSDRSSEFW SERSAKNQSR LQKVFAVIGI NTAFSSKKRR DSVRQTWMPT GEKLKKIEKE KGIVVRFVIG HSATPGGVLD KAIDEEDSEH KDFLRLKHIE
201: GYHQLSTKTR LYFSTATAMY DAEFYVKVDD DVHVNLGMLV TTLARYQSRP RIYIGCMKSG PVLSQKGVKY HEPEFWKFGE EGNKYFRHAT GQIYAISKDL
301: ATYISTNQGI LHRYANEDVS LGAWMLGLEV EHVDERSMCC GTPPDCQWKA QAGNVCAASF DWSCSGICKS VDRMARVHRA CAEGDTPLAN FRFFV

Arabidopsis Description

Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:F4HR76]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.