CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G286500.1	Wheat	mitochondrion	91.33	91.59
TraesCS7A01G293200.1	Wheat	mitochondrion	90.75	91.01
TraesCS7B01G185900.1	Wheat	mitochondrion	90.46	90.72
Os08t0386700-01	Rice	mitochondrion	89.02	89.8
HORVU7Hr1G063510.5	Barley	mitochondrion	89.6	89.6
Zm00001d050251_P002	Maize	mitochondrion	93.64	79.8
GSMUA_Achr4P00940_001	Banana	mitochondrion	73.12	75.07
Zm00001d032267_P003	Maize	mitochondrion	87.57	74.63
VIT_02s0025g01010.t01	Wine grape	mitochondrion	66.76	67.74
KRH64518	Soybean	mitochondrion	67.05	67.64
KRH53422	Soybean	mitochondrion	67.05	67.64
PGSC0003DMT400032067	Potato	cytosol, mitochondrion	60.69	67.09
VIT_16s0050g02460.t01	Wine grape	mitochondrion	65.32	66.08
Solyc08g081920.2.1	Tomato	nucleus	63.87	64.43
KRH27862	Soybean	mitochondrion	62.43	62.97
PGSC0003DMT400023412	Potato	mitochondrion	63.87	62.96
AT5G53340.1	Thale cress	mitochondrion	60.12	61.54
Bra003064.1-P	Field mustard	mitochondrion	58.96	61.26
CDX96213	Canola	mitochondrion	59.25	61.19
CDY14386	Canola	mitochondrion	59.54	60.77
CDY35642	Canola	mitochondrion	58.96	60.35
CDY49171	Canola	mitochondrion	58.09	60.0
Bra022647.1-P	Field mustard	mitochondrion	57.8	49.63
EER87954	Sorghum	plastid	46.53	45.61
OQU75947	Sorghum	mitochondrion	45.95	43.44
OQU85173	Sorghum	golgi, nucleus	39.6	34.42
EER88815	Sorghum	golgi	39.6	34.25
KXG22053	Sorghum	golgi, plastid	40.17	34.24
EES04570	Sorghum	golgi	39.02	33.58
EER91307	Sorghum	golgi, peroxisome, plasma membrane	39.02	33.01
KXG35748	Sorghum	golgi	36.99	32.49
EES14424	Sorghum	golgi, mitochondrion	34.97	31.43
OQU87975	Sorghum	cytosol	37.28	25.75
EES19194	Sorghum	golgi, peroxisome, plastid	27.46	25.33
KXG19339	Sorghum	golgi, mitochondrion, plastid	26.59	25.27

Protein Annotations

MapMan:18.1.2.1.2	Gene3D:3.90.550.50	EntrezGene:8073515	UniProt:C5YKM2	ncoils:Coil	InterPro:DUF4094
EnsemblPlants:EES13774	ProteinID:EES13774	ProteinID:EES13774.1	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794
GO:GO:0005802	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152
GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0010405	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	GO:GO:0018258	GO:GO:0019538	GO:GO:1990714	InterPro:Glyco_trans_31
PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF224	EnsemblPlantsGene:SORBI_3007G118500	unigene:Sbi.17190
UniParc:UPI0001A87EA0	RefSeq:XP_002444279.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:51202110..51207287

Molecular Weight (calculated)

38897.4 Da

IEP (calculated)

8.670

GRAVY (calculated)

-0.364

Length

346 amino acids

Sequence
(BLAST)

001: MQIREGPARR QAPSAVGALR SPMSAMMLAM FATMASFYVA GRLWQDAQNR VYLIKELDRR TGQGQSAISV DDTLKVVACR QQGKRLASLE MELAAAKHEG
101: FVGKYNPETN GTHSGKKPLI VIGIMTSFGR KNYRDAVRKS WLPTGSMLKK LEEEKGIVVR FVVGRSANRG DTFDREIDEE NRSTRDFLIL DDHIESDEEH
201: PKKTKSFFAN AADTFDAAFY AKVNDDIYIN VDTLSAMLET HWDKPRVYIG CMKSGEVFSD STHKWYEPDW WKFGDGKSYF RHASGEMFVI SRAIAQFISI
301: NKSVLRTYAH DDVSVGSWMI GLAVKHVNEA KLCCSSWPSG AMCSAL

Best Arabidopsis Sequence Match ( AT5G53340.1 )
(BLAST)

001: MARKGSSIRL SSSRISTLLL FMFATFASFY VAGRLWQESQ TRVHLINELD RVTGQGKSAI SVDDTLKIIA CREQKKTLAA LEMELSSARQ EGFVSKSPKL
101: ADGTETKKRP LVVIGIMTSL GNKKKRDAVR QAWMGTGASL KKLESEKGVI ARFVIGRSAN KGDSMDKSID TENSQTDDFI ILDDVVEAPE EASKKVKLFF
201: AYAADRWDAQ FYAKAIDNIY VNIDALGTTL AAHLENPRAY IGCMKSGEVF SEPNHKWYEP EWWKFGDKKA YFRHAYGEMY VITHALARFV SINRDILHSY
301: AHDDVSTGSW FVGLDVKHVD EGKFCCSAWS SEAICAGV

Arabidopsis Description

HPTG1Hydroxyproline O-galactosyltransferase HPGT1 [Source:UniProtKB/Swiss-Prot;Acc:Q94F27]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.