CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid

Predictor Summary:

plastid 4
mitochondrion 4
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036240_P003	Maize	plastid	97.53	97.8
Zm00001d045297_P001	Maize	plastid	66.48	94.53
TraesCS7D01G111900.1	Wheat	plastid	87.09	87.33
Os06t0156900-01	Rice	golgi, plastid	88.19	87.23
TraesCS7A01G115200.1	Wheat	plastid	86.26	86.5
TraesCS7B01G013300.1	Wheat	plastid	86.54	85.14
GSMUA_Achr7P14080_001	Banana	golgi, plastid	70.88	75.0
HORVU7Hr1G024690.2	Barley	mitochondrion, plastid	86.54	73.09
PGSC0003DMT400054913	Potato	golgi, mitochondrion	67.31	70.4
Solyc10g007200.2.1	Tomato	golgi, mitochondrion	67.03	70.11
KRH55102	Soybean	plastid	64.29	69.23
KRH21986	Soybean	mitochondrion	63.19	68.45
VIT_19s0014g01490.t01	Wine grape	golgi, mitochondrion, plastid	65.11	68.1
KRH26222	Soybean	plastid	62.64	67.46
Bra001576.1-P	Field mustard	mitochondrion	63.19	67.25
CDX82456	Canola	mitochondrion	63.19	67.25
AT1G53290.1	Thale cress	mitochondrion	63.74	67.25
Bra027291.1-P	Field mustard	mitochondrion	63.19	67.06
PGSC0003DMT400032365	Potato	plastid	64.01	66.57
Solyc07g062590.2.1	Tomato	plastid	64.01	66.38
CDX97620	Canola	mitochondrion	62.36	66.37
CDX75799	Canola	mitochondrion	62.36	66.37
AT3G14960.1	Thale cress	mitochondrion	62.09	65.89
CDX98518	Canola	mitochondrion	62.91	65.24
CDY25866	Canola	mitochondrion	62.09	64.94
CDY55848	Canola	mitochondrion	62.09	64.94
Bra038114.1-P	Field mustard	mitochondrion	62.09	64.94
CDY55849	Canola	mitochondrion	61.81	64.66
GSMUA_Achr10P...	Banana	mitochondrion	53.3	62.99
EES19194	Sorghum	golgi, peroxisome, plastid	42.86	41.6
KXG22053	Sorghum	golgi, plastid	31.87	28.57
EES14424	Sorghum	golgi, mitochondrion	29.95	28.31
OQU85173	Sorghum	golgi, nucleus	30.77	28.14
EES04570	Sorghum	golgi	30.22	27.36
EER88815	Sorghum	golgi	29.95	27.25
EER91307	Sorghum	golgi, peroxisome, plasma membrane	30.49	27.14
KXG35748	Sorghum	golgi	28.85	26.65
EES13774	Sorghum	mitochondrion	25.27	26.59
EER87954	Sorghum	plastid	23.9	24.65
OQU75947	Sorghum	mitochondrion	24.45	24.32
OQU87975	Sorghum	cytosol	31.32	22.75

Protein Annotations

MapMan:21.4.1.1.5.3	EntrezGene:8069173	UniProt:A0A194YH88	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975
GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538
InterPro:Glyco_trans_31	InterPro:IPR029044	EnsemblPlants:KXG19339	ProteinID:KXG19339	ProteinID:KXG19339.2	InterPro:Nucleotide-diphossugar_trans
PFAM:PF01762	PFscan:PS51257	PANTHER:PTHR11214	PANTHER:PTHR11214:SF108	EnsemblPlantsGene:SORBI_3010G044800	SUPFAM:SSF53448
TMHMM:TMhelix	UniParc:UPI0001A89012	RefSeq:XP_002436508.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:+:3465479..3471390

Molecular Weight (calculated)

40104.9 Da

IEP (calculated)

8.001

GRAVY (calculated)

-0.151

Length

364 amino acids

Sequence
(BLAST)

001: MPGSPKVFFA SSASRRGGAL RRLLSTPAFS AACLLFGLAG FLAAALTLSR SPSVTHSRCP DSSRPLSVSV AWDRRPGDGS AAGSAELPAS LATGSRGRHK
101: VMAFVGIFTG FGSIGRRRAL RRTWLPADRQ GLLRLEEATG LAFRFVIGKS NSKNKMAALN REVEEYDDFV LLDLEEEYSR LPYKTLAFFK AAYALYDSDF
201: YVKADDDIYL RPDRLSLLLA KERSHPQTYI GCMKKGPVFT DPKLKWYEPQ SFLLGSEYFL HAYGPIYALS ADVVASLVAL RNNSFRMFSN EDVTIGSWML
301: AMNVNHENTH ALCEADCTES SVAVWDIPKC SGLCHPEVKM LELHQRKECT GGPTVAAEVS ESED

Best Arabidopsis Sequence Match ( AT1G53290.1 )
(BLAST)

001: MHSPRKLFHA RSSLATRRST ALVVLTSLAI GIAGFTFGLA VILIPGLRLT GRNCLTNTPP KTVRVVWDVA GNSNGVVSGE KKRHKVMGFV GIQTGFGSAG
101: RRRSLRKTWM PSDPEGLRRL EESTGLAIRF MIGKTKSEEK MAQLRREIAE YDDFVLLDIE EEYSKLPYKT LAFFKAAYAL YDSEFYVKAD DDIYLRPDRL
201: SLLLAKERSH SQTYLGCLKK GPVFTDPKLK WYEPLSHLLG KEYFLHAYGP IYALSADVVA SLVALKNNSF RMFNNEDVTI GAWMLAMNVN HENHHILCEP
301: ECSPSSVAVW DIPKCSGLCN PEKRMLELHK QESCSKSPTL PSDDE

Arabidopsis Description

B3GALT14Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q798]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.