Factsheet for TraesCS7B01G041500.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, mitochondrion, plastid, cytosol, golgi

Predictor Summary:

plastid 1
mitochondrion 3
golgi 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G139800.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	94.69	95.22
TraesCS7D01G141100.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	94.13	95.2
HORVU7Hr1G028670.1	Barley	cytosol, golgi, plastid	93.58	89.1
Os06t0176200-01	Rice	golgi, mitochondrion, peroxisome, plastid	86.03	87.01
Os06t0177300-01	Rice	golgi, mitochondrion, peroxisome, plastid	86.03	87.01
Zm00001d045146_P002	Maize	plasma membrane	81.01	82.15
EER87954	Sorghum	plastid	80.73	81.87
OQU75947	Sorghum	mitochondrion	74.86	73.22
GSMUA_Achr8P24200_001	Banana	cytosol	71.23	70.83
VIT_04s0008g06480.t01	Wine grape	golgi	60.89	64.31
CDY11534	Canola	plastid	61.73	64.06
Bra007804.1-P	Field mustard	plastid	61.45	63.58
CDY58927	Canola	cytosol	60.89	63.37
KRH05191	Soybean	mitochondrion, plastid	56.42	63.32
Bra011324.1-P	Field mustard	plastid	61.17	62.93
AT4G32120.1	Thale cress	golgi, nucleus, peroxisome	60.61	62.9
CDX75222	Canola	plastid	60.89	62.64
CDX68818	Canola	plastid	60.89	62.46
AT2G25300.1	Thale cress	plastid	59.5	61.56
Solyc08g029170.2.1	Tomato	plastid	59.22	59.72
KRH15831	Soybean	mitochondrion	62.01	55.64
TraesCS7B01G185900.1	Wheat	mitochondrion	44.13	45.8
TraesCS6B01G166400.1	Wheat	golgi	34.64	31.0
TraesCS5B01G233700.1	Wheat	golgi	33.52	30.38
TraesCS1B01G278100.1	Wheat	golgi	33.8	30.17
TraesCS7B01G241500.2	Wheat	cytosol, golgi, mitochondrion, nucleus	33.52	30.0
TraesCS7B01G358000.2	Wheat	golgi	33.8	29.58
TraesCS6B01G227300.1	Wheat	golgi	32.68	29.47
TraesCS3B01G419800.1	Wheat	golgi	31.84	28.08
TraesCS7B01G217700.1	Wheat	extracellular, golgi, peroxisome	31.01	27.21
TraesCS7B01G013300.1	Wheat	plastid	25.7	24.86
TraesCS1B01G144600.1	Wheat	cytosol, golgi, peroxisome	25.7	24.47

Protein Annotations

EnsemblPlants:TraesCS7B01G041500.1	EnsemblPlantsGene:TraesCS7B01G041500	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005975
GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_31	PANTHER:PTHR11214
PANTHER:PTHR11214:SF124	PFAM:PF01762	SEG:seg	MapMan:18.1.2.1.2	:	:

Description

No Description!

Coordinates

chr7B:+:41168229..41172416

Molecular Weight (calculated)

39454.9 Da

IEP (calculated)

7.304

GRAVY (calculated)

-0.253

Length

358 amino acids

Sequence
(BLAST)

001: METLASAMRR DNRRFKTPPS SSAAAASAAA ASAGRVPLVM AFLACLAWVY VAGRLWQDAQ TRAILSGLLE KSTGSLPKEI SVDDKLRDLG CTGIGRKIAE
101: AEMDIAKAKS EGYLWGNGTG AGAGGSDRKK FLAVIGVYTG FGSRLKRNTF RGSWMPRGDA LKTLEEKGVV IRFVIGRSPN RGDSLDRNIN EESRKTNDFL
201: ILESHEEAAE ELPKKVKFFF SAAIEAWDAE FYVKIDDNIN LDLAGLIEML NARRGSQGLY MGCMKSGAVV SEEEQQWYEP EWWKFGDSRT YFRHAAGSLF
301: ILSNNLARYI NINSASLQSY AHDDISVGSW MMGLNATYVD DDRLCCLSPV QEKVCSFG

Best Arabidopsis Sequence Match ( AT4G32120.1 )
(BLAST)

001: MESLPTTVSG KSDRRGRFSK SQNTSKPSLI LAFFSCLAWL YVAGRLWQDA QYRAALNTVL KMNYDQRPKV LTVEDKLVVL GCKDLERRIV ETEMELAQAK
101: SQGYLKKQKS VSSSGKKMLA VIGVYTGFGS HLKRNKFRGS WMPRDDALKK LEERGVVIRF VIGRSANRGD SLDRKIDEEN RATKDFLILE NHEEAQEELP
201: KKVKFFYSAA VQNWDAEFYV KVDDNVDLDL EGMIALLESR RSQDGAYIGC MKSGDVITEE GSQWYEPEWW KFGDDKSYFR HATGSLVILS KNLAQYVNIN
301: SGLLKTYAFD DTTIGSWMIG VQATYIDDNR LCCSSTRQEK VCSMA

Arabidopsis Description

HPGT2Hydroxyproline O-galactosyltransferase HPGT2 [Source:UniProtKB/Swiss-Prot;Acc:Q94A05]
SUBAcon: [peroxisome,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.