Factsheet for Os08t0408500-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13814	Sorghum	nucleus	62.86	64.94
Zm00001d032295_P001	Maize	nucleus	60.71	64.89
TraesCS7D01G469200.1	Wheat	nucleus	35.71	59.88
Os03t0191900-01	Rice	nucleus	44.64	42.09
GSMUA_Achr9P12950_001	Banana	nucleus	49.29	40.71
Os02t0752800-01	Rice	nucleus	47.5	39.35
CDX73367	Canola	nucleus	39.64	34.58
AT1G36060.1	Thale cress	nucleus	38.57	34.39
Bra040381.1-P	Field mustard	nucleus	39.29	34.27
CDY48227	Canola	nucleus	39.29	34.27
Os02t0797100-00	Rice	mitochondrion	20.36	33.14
Os06t0181700-01	Rice	mitochondrion	20.36	32.02
Os10t0371100-00	Rice	nucleus	40.0	31.11
Os05t0572000-00	Rice	nucleus	25.0	25.64
Os02t0202000-01	Rice	nucleus	17.86	24.39
Os04t0655700-00	Rice	nucleus	12.86	23.53
Os06t0604000-02	Rice	nucleus	17.86	20.58
Os04t0529100-01	Rice	nucleus	27.5	20.42
Os02t0638650-01	Rice	nucleus	29.64	17.55

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	EntrezGene:4345541	EMBL:AK068312	EMBL:AK105725	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ProteinID:BAC98621.1	ProteinID:BAC99621.1	ProteinID:BAF23693.1	ProteinID:BAT05382.1	InterPro:DNA-bd_dom_sf
ProteinID:EAZ42695.1	EMBL:FJ940221	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os08g0408500	EnsemblPlants:Os08t0408500-01	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31657	PANTHER:PTHR31657:SF17	UniProt:Q6Z9V4	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI00001D6BD0	RefSeq:XP_015650910.1	SEG:seg	:	:	:

Description

ETHYLENE RESPONSE FACTOR 48Pathogenesis-related transcriptional factor and ERF domain containing protein. (Os08t0408500-01)

Coordinates

chr8:+:19547328..19548978

Molecular Weight (calculated)

29526.5 Da

IEP (calculated)

7.762

GRAVY (calculated)

-0.441

Length

280 amino acids

Sequence
(BLAST)

001: MAAAIEGNLM RALGEAPSPQ MQKIAPPPFH PGLPPAPANF SSAGVHGFHY MGPAQLSPAQ IQRVQAQLHM QRQAQSGLGP RAQPMKPASA AAPAAAAARA
101: QKLYRGVRQR HWGKWVAEIR LPRNRTRLWL GTFDTAEEAA LTYDQAAYRL RGDAARLNFP DNAASRGPLD AAVDAKLQAI CDTIAASKNA SSRSRGGAGR
201: AMPINAPLVA AASSSSGSDH SGGGDDGGSE TSSSSAAASP LAEMEQLDFS EVPWDEAEGF ALTKYPSYEI DWDSLLNNNN

Best Arabidopsis Sequence Match ( AT1G78080.1 )
(BLAST)

001: MAAAMNLYTC SRSFQDSGGE LMDALVPFIK SVSDSPSSSS AASASAFLHP SAFSLPPLPG YYPDSTFLTQ PFSYGSDLQQ TGSLIGLNNL SSSQIHQIQS
101: QIHHPLPPTH HNNNNSFSNL LSPKPLLMKQ SGVAGSCFAY GSGVPSKPTK LYRGVRQRHW GKWVAEIRLP RNRTRLWLGT FDTAEEAALA YDKAAYKLRG
201: DFARLNFPNL RHNGSHIGGD FGEYKPLHSS VDAKLEAICK SMAETQKQDK STKSSKKREK KVSSPDLSEK VKAEENSVSI GGSPPVTEFE ESTAGSSPLS
301: DLTFADPEEP PQWNETFSLE KYPSYEIDWD SILA

Arabidopsis Description

RAP2-4Ethylene-responsive transcription factor RAP2-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.