Factsheet for Os02t0202000-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G038120.3	Barley	nucleus	82.44	82.04
TraesCS6B01G210300.1	Wheat	nucleus	82.44	81.64
TraesCS6A01G181400.2	Wheat	nucleus	82.44	81.64
KXG29745	Sorghum	nucleus	81.46	78.4
Zm00001d015759_P001	Maize	nucleus	80.98	77.93
GSMUA_Achr9P28540_001	Banana	mitochondrion, nucleus	66.34	68.34
GSMUA_Achr7P10160_001	Banana	nucleus	67.8	67.48
KRH09737	Soybean	nucleus	57.07	66.48
Os06t0604000-02	Rice	nucleus	77.56	65.43
VIT_09s0002g06750.t01	Wine grape	mitochondrion	57.56	63.78
PGSC0003DMT400007494	Potato	nucleus	60.98	61.88
VIT_11s0016g05340.t01	Wine grape	nucleus	60.0	60.29
KRH62994	Soybean	nucleus	61.95	58.26
KRH54960	Soybean	nucleus	60.49	56.62
Solyc12g009490.1.1	Tomato	nucleus	59.51	54.95
KRH03696	Soybean	nucleus	62.44	53.56
KRH20262	Soybean	nucleus	61.95	53.36
Os02t0797100-00	Rice	mitochondrion	31.71	37.79
Os06t0181700-01	Rice	mitochondrion	32.68	37.64
Os04t0655700-00	Rice	nucleus	23.41	31.37
Os08t0408500-01	Rice	nucleus	24.39	17.86
Os03t0191900-01	Rice	nucleus	24.88	17.17
Os05t0572000-00	Rice	nucleus	21.46	16.12
Os02t0752800-01	Rice	nucleus	24.39	14.79
Os10t0371100-00	Rice	nucleus	22.44	12.78
Os04t0529100-01	Rice	nucleus	22.44	12.2
Os02t0638650-01	Rice	nucleus	23.9	10.36

Protein Annotations

MapMan:15.5.7.1	MapMan:21.9.3.1	Gene3D:3.30.730.10	EntrezGene:4328653	EntrezGene:4341466	ProteinID:ABS82040.1
EMBL:AK061163	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ProteinID:BAD15859.1	ProteinID:BAD35470.1
ProteinID:BAF08140.1	ProteinID:BAS98513.1	InterPro:DNA-bd_dom_sf	EMBL:DQ468387	ProteinID:EAZ22135.1	ProteinID:EAZ37571.1
EMBL:FJ940222	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	EnsemblPlantsGene:Os02g0202000	EnsemblPlants:Os02t0202000-01	PFAM:PF00847	PIRSF:PIRSF038123	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF12	UniProt:Q6Z786	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI0000358BBB	RefSeq:XP_015627194.1	RefSeq:XP_015641433.1	SEG:seg	:	:

Description

ETHYLENE-RESPONSIVE ELEMENT-BINDING FACTOR 3Ethylene response factor, Transcription factor, Regulation of wax synthesis, Drought tolerance (Os02t0202000-01)

Coordinates

chr2:+:5688698..5689609

Molecular Weight (calculated)

22445.4 Da

IEP (calculated)

9.330

GRAVY (calculated)

-0.613

Length

205 amino acids

Sequence
(BLAST)

001: MVQPKKKFRG VRQRHWGSWV SEIRHPLLKR RVWLGTFETA EEAARAYDEA AVLMSGRNAK TNFPVQRNST GDLATAADQD ARSNGGSRNS SAGNLSQILS
101: AKLRKCCKAP SPSLTCLRLD PEKSHIGVWQ KRAGARADSN WVMTVELNKE VEPTEPAAQP TSTATASQVT MDDEEKIALQ MIEELLSRSS PASPSHGEGE
201: GSFVI

Best Arabidopsis Sequence Match ( AT1G15360.2 )
(BLAST)

001: MVQTKKFRGV RQRHWGSWVA EIRHPLLKRR IWLGTFETAE EAARAYDEAA VLMSGRNAKT NFPLNNNNTG ETSEGKTDIS ASSTMSSSTS SSSLSSILSA
101: KLRKCCKSPS PSLTCLRLDT ASSHIGVWQK RAGSKSDSSW VMTVELGPAS SSQETTSKAS QDAILAPTTE VEIGGSREEV LDEEEKVALQ MIEELLNTN

Arabidopsis Description

WIN1Ethylene-responsive transcription factor WIN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI33]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.