Factsheet for GSMUA_Achr7P10160_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P05210_001	Banana	nucleus	67.96	76.92
GSMUA_Achr9P28540_001	Banana	mitochondrion, nucleus	69.9	72.36
Os02t0202000-01	Rice	nucleus	67.48	67.8
HORVU6Hr1G038120.3	Barley	nucleus	67.48	67.48
TraesCS6B01G210300.1	Wheat	nucleus	67.48	67.15
TraesCS6A01G181400.2	Wheat	nucleus	67.48	67.15
KRH09737	Soybean	nucleus	55.83	65.34
Zm00001d015759_P001	Maize	nucleus	65.53	63.38
KXG29745	Sorghum	nucleus	65.53	63.38
VIT_09s0002g06750.t01	Wine grape	mitochondrion	54.37	60.54
PGSC0003DMT400007494	Potato	nucleus	57.28	58.42
KRH62994	Soybean	nucleus	61.65	58.26
VIT_11s0016g05340.t01	Wine grape	nucleus	56.8	57.35
KRH54960	Soybean	nucleus	60.68	57.08
KRH03696	Soybean	nucleus	64.08	55.23
KRH20262	Soybean	nucleus	63.59	55.04
Solyc12g009490.1.1	Tomato	nucleus	55.83	51.8
GSMUA_Achr7P19320_001	Banana	nucleus	34.95	47.06
GSMUA_Achr5P22840_001	Banana	mitochondrion, nucleus	34.95	44.72
GSMUA_Achr9P13760_001	Banana	mitochondrion	32.04	43.42
GSMUA_Achr10P...	Banana	mitochondrion	33.98	39.77
GSMUA_Achr7P16060_001	Banana	mitochondrion	35.92	31.36
GSMUA_Achr4P02200_001	Banana	mitochondrion	33.5	29.61
GSMUA_Achr8P28500_001	Banana	nucleus	25.73	19.06
GSMUA_Achr6P10440_001	Banana	nucleus	23.79	18.77
GSMUA_Achr10P...	Banana	nucleus	25.24	18.64
GSMUA_Achr10P...	Banana	nucleus	26.21	18.37
GSMUA_AchrUn_...	Banana	nucleus	23.79	17.82
GSMUA_Achr3P04360_001	Banana	nucleus	21.36	17.6
GSMUA_Achr10P...	Banana	nucleus	29.13	17.44
GSMUA_Achr5P09470_001	Banana	nucleus	20.39	16.8
GSMUA_Achr1P27990_001	Banana	nucleus	19.9	16.53
GSMUA_Achr9P12950_001	Banana	nucleus	25.24	15.34
GSMUA_Achr3P01650_001	Banana	nucleus	24.27	15.15
GSMUA_Achr4P26080_001	Banana	nucleus	23.3	11.82
GSMUA_Achr8P14110_001	Banana	nucleus	20.39	10.55

Protein Annotations

MapMan:15.5.7.1	MapMan:21.9.3.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr7G10160_001	EnsemblPlants:GSMUA_Achr7P10160_001
EnsemblPlants:GSMUA_Achr7T10160_001	InterPro:IPR001471	InterPro:IPR036955	UniProt:M0TGA4	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF24	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000295F99B
SEG:seg	:	:	:	:	:

Description

Ethylene-responsive transcription factor WIN1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G10160_001]

Coordinates

chr7:-:8237042..8238143

Molecular Weight (calculated)

22502.7 Da

IEP (calculated)

8.516

GRAVY (calculated)

-0.488

Length

206 amino acids

Sequence
(BLAST)

001: MVQSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAARAYDEAA VLMSGRNAKT NFPMTRSPEG DAAARASSKA LSEVLSAKLR KCCKTAPSPS
101: LTCLRLDNEK SHIGVWQKRA GTRDGSNWVM TVELGNASSH HAQQAAGEAM MGPTPLAGAG TSSQEAVGGM DEEEMLALQM IEELLSRNRT TSPSHAVTAD
201: EDSFFL

Best Arabidopsis Sequence Match ( AT1G15360.2 )
(BLAST)

001: MVQTKKFRGV RQRHWGSWVA EIRHPLLKRR IWLGTFETAE EAARAYDEAA VLMSGRNAKT NFPLNNNNTG ETSEGKTDIS ASSTMSSSTS SSSLSSILSA
101: KLRKCCKSPS PSLTCLRLDT ASSHIGVWQK RAGSKSDSSW VMTVELGPAS SSQETTSKAS QDAILAPTTE VEIGGSREEV LDEEEKVALQ MIEELLNTN

Arabidopsis Description

WIN1Ethylene-responsive transcription factor WIN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI33]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.