Factsheet for GSMUA_Achr5P22840_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0043g00510.t01	Wine grape	mitochondrion, nucleus	22.98	84.09
GSMUA_Achr7P19320_001	Banana	nucleus	73.29	77.12
Zm00001d052026_P001	Maize	mitochondrion	59.01	61.69
OQU85888	Sorghum	mitochondrion	58.39	60.65
GSMUA_Achr10P...	Banana	mitochondrion	65.22	59.66
VIT_09s0002g09120.t01	Wine grape	nucleus	60.25	55.43
TraesCS6A01G360300.1	Wheat	mitochondrion	57.14	55.42
TraesCS6B01G393200.1	Wheat	mitochondrion	57.76	54.71
TraesCS6D01G343800.1	Wheat	mitochondrion	57.76	54.71
Os02t0797100-00	Rice	mitochondrion	57.14	53.49
TraesCS7B01G048100.1	Wheat	mitochondrion	52.8	52.47
CDY65537	Canola	mitochondrion	55.9	52.33
TraesCS7D01G147200.1	Wheat	mitochondrion, nucleus	52.8	52.15
Zm00001d045120_P001	Maize	mitochondrion	54.66	52.07
Bra020490.1-P	Field mustard	mitochondrion	56.52	52.0
TraesCS7D01G147100.1	Wheat	mitochondrion, nucleus	52.8	51.83
TraesCS7A01G145800.1	Wheat	mitochondrion, nucleus	53.42	51.81
AT5G25190.1	Thale cress	mitochondrion	57.76	51.38
Os06t0181700-01	Rice	mitochondrion	56.52	51.12
CDX88163	Canola	mitochondrion	55.28	50.86
VIT_09s0002g09140.t01	Wine grape	nucleus	55.9	50.85
VIT_04s0008g06000.t01	Wine grape	mitochondrion	59.01	50.8
Zm00001d035835_P001	Maize	mitochondrion	54.04	50.29
CDX87096	Canola	mitochondrion	56.52	50.28
KRH15790	Soybean	nucleus	62.11	50.25
KRH09667	Soybean	mitochondrion, nucleus	55.28	50.0
GSMUA_Achr9P13760_001	Banana	mitochondrion	47.2	50.0
Bra036536.1-P	Field mustard	mitochondrion	55.28	49.72
CDY19812	Canola	mitochondrion	55.28	49.72
KRH12836	Soybean	nucleus	39.13	49.61
KRH05258	Soybean	nucleus	62.11	49.51
KRH61698	Soybean	mitochondrion, nucleus	59.01	49.22
CDY05479	Canola	mitochondrion	56.52	49.19
KRH52366	Soybean	mitochondrion, nucleus	59.01	48.97
CDY05373	Canola	mitochondrion	55.9	48.91
KRH47384	Soybean	mitochondrion, nucleus	58.39	48.45
KRH44522	Soybean	mitochondrion	58.39	48.21
EER87969	Sorghum	mitochondrion	54.04	48.07
Bra009824.1-P	Field mustard	mitochondrion	55.9	46.88
PGSC0003DMT400067218	Potato	mitochondrion	55.28	45.41
GSMUA_Achr7P16060_001	Banana	mitochondrion	66.46	45.34
Solyc06g065820.2.1	Tomato	mitochondrion	55.9	44.12
VIT_07s0031g00420.t01	Wine grape	nucleus	25.47	42.71
KRH23632	Soybean	nucleus	55.9	39.82
GSMUA_Achr6P05210_001	Banana	nucleus	44.1	39.01
GSMUA_Achr9P28540_001	Banana	mitochondrion, nucleus	44.72	36.18
GSMUA_Achr7P10160_001	Banana	nucleus	44.72	34.95
GSMUA_Achr4P02200_001	Banana	mitochondrion	45.34	31.33
HORVU7Hr1G029870.1	Barley	mitochondrion	27.95	18.99
GSMUA_AchrUn_...	Banana	nucleus	32.3	18.91
GSMUA_Achr5P09470_001	Banana	nucleus	29.19	18.8
GSMUA_Achr6P10440_001	Banana	nucleus	29.81	18.39
GSMUA_Achr3P04360_001	Banana	nucleus	27.95	18.0
GSMUA_Achr1P27990_001	Banana	nucleus	27.33	17.74
GSMUA_Achr10P...	Banana	nucleus	31.68	17.35
GSMUA_Achr8P28500_001	Banana	nucleus	29.81	17.27
GSMUA_Achr10P...	Banana	nucleus	28.57	16.49
GSMUA_Achr9P12950_001	Banana	nucleus	32.3	15.34
GSMUA_Achr10P...	Banana	nucleus	30.43	14.24
GSMUA_Achr3P01650_001	Banana	nucleus	27.95	13.64
GSMUA_Achr4P26080_001	Banana	nucleus	28.57	11.33
GSMUA_Achr8P14110_001	Banana	nucleus	25.47	10.3

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr5G22840_001	EnsemblPlants:GSMUA_Achr5P22840_001
EnsemblPlants:GSMUA_Achr5T22840_001	InterPro:IPR001471	InterPro:IPR036955	UniProt:M0T0V9	PFAM:PF00847	PIRSF:PIRSF038123
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF19	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI00029602AD	SEG:seg	:	:	:	:

Description

Ethylene-responsive transcription factor ERF003 [Source:GMGC_GENE;Acc:GSMUA_Achr5G22840_001]

Coordinates

chr5:-:24738605..24739172

Molecular Weight (calculated)

18072.6 Da

IEP (calculated)

7.276

GRAVY (calculated)

-0.399

Length

161 amino acids

Sequence
(BLAST)

001: MASSQKRYRG VRQRHWGSWV SEIRHPLLKM RIWLGTFETA EDAARAYDEA AVLMCGARAK TNFPCSPHRP PSSHCKYLSA ALTAKLHRCN LLSLQAAQPV
101: VMHAPRRPPV AAEHKEETSR VAEENGHGGV EFSCLEEHHV EEMIEELLDS NLSMELCCAA L

Best Arabidopsis Sequence Match ( AT5G25190.1 )
(BLAST)

001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAI PTSSSKLLSA TLTAKLHKCY MASLQMTKQT
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L

Arabidopsis Description

ERF003Ethylene-responsive transcription factor ERF003 [Source:UniProtKB/Swiss-Prot;Acc:Q94AW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.