Factsheet for GSMUA_Achr8P14110_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P26080_001	Banana	nucleus	39.95	39.16
GSMUA_Achr10P...	Banana	nucleus	20.6	29.39
GSMUA_Achr6P10440_001	Banana	nucleus	18.59	28.35
GSMUA_Achr8P28500_001	Banana	nucleus	19.35	27.7
GSMUA_Achr3P04360_001	Banana	nucleus	17.09	27.2
GSMUA_AchrUn_...	Banana	nucleus	18.34	26.55
GSMUA_Achr5P22840_001	Banana	mitochondrion, nucleus	10.3	25.47
GSMUA_Achr6P05210_001	Banana	nucleus	11.56	25.27
GSMUA_Achr3P01650_001	Banana	nucleus	20.85	25.15
GSMUA_Achr7P19320_001	Banana	nucleus	9.55	24.84
GSMUA_Achr10P...	Banana	nucleus	18.34	24.83
GSMUA_Achr9P13760_001	Banana	mitochondrion	9.05	23.68
GSMUA_Achr5P09470_001	Banana	nucleus	14.32	22.8
GSMUA_Achr10P...	Banana	mitochondrion	9.55	21.59
GSMUA_Achr9P12950_001	Banana	nucleus	17.84	20.94
GSMUA_Achr1P27990_001	Banana	nucleus	12.81	20.56
GSMUA_Achr7P10160_001	Banana	nucleus	10.55	20.39
GSMUA_Achr9P28540_001	Banana	mitochondrion, nucleus	10.05	20.1
GSMUA_Achr10P...	Banana	nucleus	16.08	18.6
GSMUA_Achr7P16060_001	Banana	mitochondrion	10.3	17.37
GSMUA_Achr4P02200_001	Banana	mitochondrion	8.54	14.59

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.1	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr8G14110_001	EnsemblPlants:GSMUA_Achr8P14110_001	EnsemblPlants:GSMUA_Achr8T14110_001
InterPro:IPR001471	InterPro:IPR036955	UniProt:M0TQB4	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31657	PANTHER:PTHR31657:SF19	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00029512BB	SEG:seg

Description

Putative Ethylene-responsive transcription factor ERF054 [Source:GMGC_GENE;Acc:GSMUA_Achr8G14110_001]

Coordinates

chr8:+:10708681..10709979

Molecular Weight (calculated)

42617.7 Da

IEP (calculated)

7.473

GRAVY (calculated)

-0.701

Length

398 amino acids

Sequence
(BLAST)

001: MEGSDGGGRQ KGVQRTSVQP RPLKKIRSPD RRHHYSSTST SSSSSSSQCS SNSNPVSSSF SGPPVSSSST LYSKPLFPFA SAGSSRAVVD PTLSPPARSS
101: LHHQPPPWQQ QQMISFGRHH PHQIRTYPPS PPFMTTEEAA ATQQQLQHRV YQEQYLLRYW SEALNLNPRA RMRHWGKWVA EIRLPRNRSR LWLGTFNTAE
201: EAALAYDREA FKLRGENAKL NFPHLFLGTG GGSGDRGGAS CSSSSSSPPA TPEEARPQTI HHQSQPRPPP PVAFETTGVT ATVIGSSSSG DGSASGLDES
301: GGSEPTAPET TTPEMVWGNT AAAAEEWFST WGPGSSIWDD IDGANSLLLH SRFTSFADMD PSNAAPPSSA ATTTASPDAD ASSTAGPGPS SSVFLWKE

Best Arabidopsis Sequence Match ( AT4G28140.1 )
(BLAST)

001: MDFDEELNLC ITKGKNVDHS FGGEASSTSP RSMKKMKSPS RPKPYFQSSS SPYSLEAFPF SLDPTLQNQQ QQLGSYVPVL EQRQDPTMQG QKQMISFSPQ
101: QQQQQQQYMA QYWSDTLNLS PRGRMMMMMS QEAVQPYIAT KLYRGVRQRQ WGKWVAEIRK PRSRARLWLG TFDTAEEAAM AYDRQAFKLR GHSATLNFPE
201: HFVNKESELH DSNSSDQKEP ETPQPSEVNL ESKELPVIDV GREEGMAEAW YNAITSGWGP ESPLWDDLDS SHQFSSESSS SSPLSCPMRP FF

Arabidopsis Description

ERF054Ethylene-responsive transcription factor ERF054 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0J3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.