Factsheet for GSMUA_Achr8P28500_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400080372	Potato	nucleus	31.3	33.72
GSMUA_Achr9P13760_001	Banana	mitochondrion	18.35	33.55
GSMUA_Achr10P...	Banana	nucleus	30.58	30.47
GSMUA_Achr6P10440_001	Banana	nucleus	28.42	30.27
GSMUA_Achr6P05210_001	Banana	nucleus	19.78	30.22
GSMUA_Achr7P19320_001	Banana	nucleus	16.55	30.07
GSMUA_Achr5P22840_001	Banana	mitochondrion, nucleus	17.27	29.81
GSMUA_AchrUn_...	Banana	nucleus	28.42	28.73
GSMUA_Achr10P...	Banana	nucleus	30.22	28.57
GSMUA_Achr3P04360_001	Banana	nucleus	25.54	28.4
CDY53558	Canola	nucleus	33.09	26.36
VIT_05s0029g00140.t01	Wine grape	nucleus	38.13	26.24
Bra032724.1-P	Field mustard	nucleus	32.73	26.0
GSMUA_Achr1P27990_001	Banana	nucleus	23.02	25.81
GSMUA_Achr7P10160_001	Banana	nucleus	19.06	25.73
GSMUA_Achr9P28540_001	Banana	mitochondrion, nucleus	18.35	25.63
GSMUA_Achr10P...	Banana	mitochondrion	16.19	25.57
KRH34596	Soybean	nucleus	34.89	25.06
KRG92191	Soybean	nucleus	36.69	25.0
AT4G13620.1	Thale cress	nucleus	34.53	24.74
GSMUA_Achr9P12950_001	Banana	nucleus	29.86	24.48
GSMUA_Achr5P09470_001	Banana	nucleus	21.94	24.4
Solyc09g091950.1.1	Tomato	extracellular, nucleus	35.61	23.63
GSMUA_Achr10P...	Banana	nucleus	29.14	23.55
GSMUA_Achr3P01650_001	Banana	nucleus	27.7	23.33
GSMUA_Achr4P02200_001	Banana	mitochondrion	17.99	21.46
GSMUA_Achr7P16060_001	Banana	mitochondrion	16.91	19.92
GSMUA_Achr8P14110_001	Banana	nucleus	27.7	19.35
GSMUA_Achr4P26080_001	Banana	nucleus	26.26	17.98

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr8G28500_001	EnsemblPlants:GSMUA_Achr8P28500_001	EnsemblPlants:GSMUA_Achr8T28500_001
InterPro:IPR001471	InterPro:IPR036955	UniProt:M0TUF3	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31657	PANTHER:PTHR31657:SF23	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000295AB0F	SEG:seg

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G28500_001]

Coordinates

chr8:-:31292429..31293265

Molecular Weight (calculated)

30415.0 Da

IEP (calculated)

8.837

GRAVY (calculated)

-0.471

Length

278 amino acids

Sequence
(BLAST)

001: MEDQFPFLRG GIEFNGVKVL PSDLQHSDRS SSSSSVLSFL NPRTPLPSSS SASAAAAAAA SESPNMATFL LQKQRHHESG IAGCLQCSVS CNMIEFCSTR
101: GRRPTKLFRG VRQRHWGKWV AEIRMPRNRT RVWLGTFDTA EDAAMAYDMA AYKLRGDSAY LNFPHLKHDL HELGSPHLHS SVASLLEAKL NALCNSSSSS
201: SSSGSCKQKK AGKDDKSAVA SITRTPRKEG LQSDQGRREI SQQELISRGD AEGVLLSRMP SLDMDMIWDS LPMPAAET

Best Arabidopsis Sequence Match ( AT4G13620.1 )
(BLAST)

001: MITPIHTQHS LILVYINIYS PPILSKLRTG FILWTNTQKT NKKRNMEDQF PKIETSFMHD KLLSSGIYGF LSSSTPPQLL GVPIFLEGMK SPLLPASSTP
101: SYFVSPHDHE LTSSIHPSPV ASVPWNFLES FPQSQHPDHH PSKPPNLTLF LKEPKLLELS QSESNMSPYH KYIPNSFYQS DQNRNEWVEI NKTLTNYPSK
201: GFGNYWLSTT KTQPMKSKTR KVVQTTTPTK LYRGVRQRHW GKWVAEIRLP RNRTRVWLGT FETAEQAAMA YDTAAYILRG EFAHLNFPDL KHQLKSGSLR
301: CMIASLLESK IQQISSSQVS NSPSPPPPKV GTPEQKNHHM KMESGEDVMM KKQKSHKEVM EGDGVQLSRM PSLDMDLIWD ALSFPHSS

Arabidopsis Description

ERF062Ethylene-responsive transcription factor ERF062 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.