Factsheet for GSMUA_Achr4P02200_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P13760_001	Banana	mitochondrion	45.92	70.39
TraesCS2D01G503900.1	Wheat	mitochondrion	38.63	57.69
TraesCS2B01G531100.1	Wheat	mitochondrion	38.2	57.42
TraesCS2A01G503100.1	Wheat	mitochondrion	38.63	57.32
TraesCS2D01G503100.1	Wheat	nucleus	36.48	56.67
TraesCS2B01G530800.1	Wheat	nucleus	36.48	56.29
EES12999	Sorghum	mitochondrion	38.63	52.33
Zm00001d026486_P001	Maize	mitochondrion	37.34	50.58
GSMUA_Achr7P19320_001	Banana	nucleus	33.05	50.33
GSMUA_Achr5P22840_001	Banana	mitochondrion, nucleus	31.33	45.34
GSMUA_Achr10P...	Banana	mitochondrion	33.05	43.75
Os04t0655700-00	Rice	nucleus	27.9	42.48
Zm00001d002011_P001	Maize	mitochondrion, nucleus	29.61	40.59
GSMUA_Achr7P16060_001	Banana	mitochondrion	39.06	38.56
GSMUA_Achr6P05210_001	Banana	nucleus	27.9	35.71
GSMUA_Achr7P10160_001	Banana	nucleus	29.61	33.5
GSMUA_Achr9P28540_001	Banana	mitochondrion, nucleus	28.33	33.17
GSMUA_Achr6P10440_001	Banana	nucleus	21.03	18.77
GSMUA_AchrUn_...	Banana	nucleus	21.46	18.18
GSMUA_Achr3P04360_001	Banana	nucleus	19.31	18.0
GSMUA_Achr8P28500_001	Banana	nucleus	21.46	17.99
GSMUA_Achr10P...	Banana	nucleus	21.46	17.92
GSMUA_Achr10P...	Banana	nucleus	22.32	17.69
GSMUA_Achr1P27990_001	Banana	nucleus	18.45	17.34
GSMUA_Achr5P09470_001	Banana	nucleus	18.45	17.2
GSMUA_Achr3P01650_001	Banana	nucleus	21.46	15.15
GSMUA_Achr9P12950_001	Banana	nucleus	21.46	14.75
GSMUA_Achr10P...	Banana	nucleus	21.46	14.53
GSMUA_Achr4P26080_001	Banana	nucleus	19.31	11.08
GSMUA_Achr8P14110_001	Banana	nucleus	14.59	8.54

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr4G02200_001	EnsemblPlants:GSMUA_Achr4P02200_001	EnsemblPlants:GSMUA_Achr4T02200_001
InterPro:IPR001471	InterPro:IPR036955	UniProt:M0SKD7	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31194	PANTHER:PTHR31194:SF4	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000296BA45	SEG:seg

Description

Ethylene-responsive transcription factor ERF003 [Source:GMGC_GENE;Acc:GSMUA_Achr4G02200_001]

Coordinates

chr4:-:1950285..1953242

Molecular Weight (calculated)

26023.8 Da

IEP (calculated)

4.942

GRAVY (calculated)

-0.253

Length

233 amino acids

Sequence
(BLAST)

001: MPKLQRYRGV RQRHWGSWVS EIRHPTLKTR IWLGTFETAE DAARAYDEAA RLMCGPTART NFPFDPNFSS VLSPNLMAKL ERCCSASGDE SRRGKATPIG
101: SQEDVAQCTD EEYIEEMIQE LTYSGSLEIS TSSSSSSSSS CYLEVLWSHL VAISVSARAV LFGGEGLNMQ PMTDTFALET CQCALCSSWY VVPFTILLKM
201: DPGWLYLVAV EKKAYSNEDL DAQHPSWLPP MHA

Best Arabidopsis Sequence Match ( AT5G25190.1 )
(BLAST)

001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAI PTSSSKLLSA TLTAKLHKCY MASLQMTKQT
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L

Arabidopsis Description

ERF003Ethylene-responsive transcription factor ERF003 [Source:UniProtKB/Swiss-Prot;Acc:Q94AW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.