Factsheet for Zm00001d002011_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

mitochondrion 4
nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G530800.1	Wheat	nucleus	44.12	49.67
TraesCS2D01G503100.1	Wheat	nucleus	43.53	49.33
TraesCS2B01G531100.1	Wheat	mitochondrion	44.71	49.03
TraesCS2A01G503100.1	Wheat	mitochondrion	44.71	48.41
TraesCS2D01G503900.1	Wheat	mitochondrion	44.12	48.08
Zm00001d026486_P001	Maize	mitochondrion	47.65	47.09
Os04t0655700-00	Rice	nucleus	40.59	45.1
Zm00001d052026_P001	Maize	mitochondrion	28.82	31.82
Zm00001d035835_P001	Maize	mitochondrion	31.76	31.21
Zm00001d045120_P001	Maize	mitochondrion	30.59	30.77
GSMUA_Achr4P02200_001	Banana	mitochondrion	40.59	29.61
Zm00001d015759_P001	Maize	nucleus	37.06	29.58
Zm00001d046501_P001	Maize	nucleus	35.29	27.65
Zm00001d036889_P001	Maize	nucleus	35.29	26.09
Zm00001d032295_P001	Maize	nucleus	23.53	15.27
Zm00001d030513_P001	Maize	mitochondrion	23.53	14.55
Zm00001d009622_P001	Maize	plastid	21.18	13.69
Zm00001d039077_P001	Maize	plastid	21.76	12.89
Zm00001d020267_P001	Maize	nucleus	22.35	12.84
Zm00001d048208_P001	Maize	nucleus	22.35	12.79
Zm00001d052229_P001	Maize	nucleus	23.53	12.66
Zm00001d028017_P001	Maize	nucleus	21.76	12.33
Zm00001d018081_P001	Maize	nucleus	23.53	11.73
Zm00001d044857_P001	Maize	nucleus	22.94	11.17
Zm00001d025910_P001	Maize	nucleus	17.65	7.43
Zm00001d051239_P001	Maize	nucleus	18.82	7.19
Zm00001d017366_P001	Maize	nucleus	18.82	7.13
Zm00001d002867_P001	Maize	nucleus	17.65	6.64

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.2	UniProt:A0A1D6DVL9	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	ProteinID:ONM12766.1	PFAM:PF00847	PIRSF:PIRSF038123	PFscan:PS51032	PANTHER:PTHR31194
PANTHER:PTHR31194:SF4	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000845701E	EnsemblPlantsGene:Zm00001d002011	EnsemblPlants:Zm00001d002011_P001
EnsemblPlants:Zm00001d002011_T001	SEG:seg	:	:	:	:

Description

AP2-EREBP-transcription factor 45Ethylene-responsive transcription factor ERF003

Coordinates

chr2:+:4324615..4325127

Molecular Weight (calculated)

18215.2 Da

IEP (calculated)

4.953

GRAVY (calculated)

-0.664

Length

170 amino acids

Sequence
(BLAST)

001: MSIMHVQRRV RLMSCERLCR KTRIWLGTYE TAEDAARAYD EAARLISGPA ARTNFPLTGG GGGGTLSPTL RAKLEKCCCT ALAQEAQHGA DVPRTGAGRG
101: DDGSSRRDRR RDGDEEDEEA GVKVEPDADA DGEEYIEEMI RELTYYGPVE IQHHPSAAGG GGACSSSAIG

Best Arabidopsis Sequence Match ( AT5G25190.1 )
(BLAST)

001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAI PTSSSKLLSA TLTAKLHKCY MASLQMTKQT
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L

Arabidopsis Description

ERF003Ethylene-responsive transcription factor ERF003 [Source:UniProtKB/Swiss-Prot;Acc:Q94AW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.