Factsheet for Zm00001d030513_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048208_P001	Maize	nucleus	50.55	46.8
Os10t0371100-00	Rice	nucleus	60.36	46.11
Zm00001d028017_P001	Maize	nucleus	49.09	45.0
Zm00001d032295_P001	Maize	nucleus	38.91	40.84
Zm00001d020267_P001	Maize	nucleus	40.73	37.84
GSMUA_Achr3P04360_001	Banana	nucleus	32.73	36.0
Zm00001d052229_P001	Maize	nucleus	41.09	35.76
Zm00001d018081_P001	Maize	nucleus	41.45	33.43
Zm00001d044857_P001	Maize	nucleus	40.73	32.09
CDX73367	Canola	nucleus	35.64	30.53
Zm00001d052026_P001	Maize	mitochondrion	17.09	30.52
Bra040381.1-P	Field mustard	nucleus	34.55	29.59
CDY48227	Canola	nucleus	34.55	29.59
AT1G36060.1	Thale cress	nucleus	33.09	28.98
Zm00001d026486_P001	Maize	mitochondrion	17.45	27.91
Zm00001d045120_P001	Maize	mitochondrion	17.09	27.81
Zm00001d035835_P001	Maize	mitochondrion	17.45	27.75
Zm00001d039077_P001	Maize	plastid	26.55	25.44
Zm00001d009622_P001	Maize	plastid	24.0	25.1
Zm00001d002011_P001	Maize	mitochondrion, nucleus	14.55	23.53
Zm00001d015759_P001	Maize	nucleus	17.09	22.07
Zm00001d046501_P001	Maize	nucleus	16.73	21.2
Zm00001d036889_P001	Maize	nucleus	17.09	20.43
Zm00001d051239_P001	Maize	nucleus	28.73	17.75
Zm00001d017366_P001	Maize	nucleus	28.0	17.15
Zm00001d025910_P001	Maize	nucleus	25.09	17.08
Zm00001d002867_P001	Maize	nucleus	27.27	16.59

Protein Annotations

EntrezGene:103644933	MapMan:15.5.7.2	Gene3D:3.30.730.10	UniProt:A0A060CWY7	ProteinID:AIB05006.1	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	ProteinID:ONM01009.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31657	PANTHER:PTHR31657:SF22	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000221F40A	EnsemblPlantsGene:Zm00001d030513
EnsemblPlants:Zm00001d030513_P001	EnsemblPlants:Zm00001d030513_T001	SEG:seg	:	:	:

Description

AP2-EREBP-transcription factor 112Ethylene-responsive transcription factor ERF055

Coordinates

chr1:+:140679257..140680084

Molecular Weight (calculated)

29905.6 Da

IEP (calculated)

8.301

GRAVY (calculated)

-0.283

Length

275 amino acids

Sequence
(BLAST)

001: MTTAAMDRHW RRLQATPPPL GAVQYYRELI HSLDTPVQAA PIMVDTEPGQ AMAIVGASRS KCYHLITPAQ AAYYYRVVGG RLGSAPRLMK PYRCLGAPAP
101: STTTTKLYRG VRQRHWGKWV AEIRLPRNRT RLWLGTYDTA EEAALAYDGA AFRLRGDAAR LNFPELRLGG THLAPPLHPT VDAKLQAVTT SAPAAPALPR
201: PESLDIESET STTTTATAYG TGLCPSSTGS SSLAKTAPLP DMQELDFSEV PWDEGDGVAL CKYPSLEIDW NAILS

Best Arabidopsis Sequence Match ( AT5G65130.2 )
(BLAST)

001: MAMALNMNAY VDEFMEALEP FMKVTSSSST SNSSNPKPLT PNFIPNNDQV LPVSNQTGPI GLNQLTPTQI LQIQTELHLR QNQSRRRAGS HLLTAKPTSM
101: KKIDVATKPV KLYRGVRQRQ WGKWVAEIRL PKNRTRLWLG TFETAQEAAL AYDQAAHKIR GDNARLNFPD IVRQGHYKQI LSPSINAKIE SICNSSDLPL
201: PQIEKQNKTE EVLSGFSKPE KEPEFGEIYG CGYSGSSPES DITLLDFSSD CVKEDESFLM GLHKYPSLEI DWDAIEKLF

Arabidopsis Description

Integrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT5G65130]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.