Factsheet for Zm00001d017366_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU85375	Sorghum	nucleus	87.75	84.19
Zm00001d051239_P001	Maize	nucleus	77.95	78.65
Os02t0638650-01	Rice	nucleus	73.27	69.56
TraesCS6D01G217800.1	Wheat	nucleus	66.37	65.21
TraesCS6B01G263800.1	Wheat	nucleus	65.48	64.76
TraesCS6A01G235100.1	Wheat	nucleus	65.03	63.34
HORVU6Hr1G060140.1	Barley	nucleus, plastid	66.15	53.71
Zm00001d002867_P001	Maize	nucleus	51.67	51.33
Zm00001d025910_P001	Maize	nucleus	45.21	50.25
Bra024222.1-P	Field mustard	nucleus	21.83	42.98
GSMUA_Achr4P26080_001	Banana	nucleus	38.75	42.86
Bra026280.1-P	Field mustard	nucleus	27.17	41.64
CDX89202	Canola	nucleus	26.95	41.3
AT4G28140.1	Thale cress	nucleus	26.73	41.1
CDY19002	Canola	nucleus	26.73	40.96
CDY58717	Canola	nucleus	23.61	40.61
CDY29884	Canola	nucleus	23.61	40.61
Bra010383.1-P	Field mustard	nucleus	24.94	40.58
CDX97423	Canola	nucleus	25.17	40.5
CDY14255	Canola	nucleus	24.28	39.49
PGSC0003DMT400047265	Potato	nucleus	32.96	38.05
CDX81987	Canola	nucleus	26.5	38.02
Solyc07g054220.1.1	Tomato	nucleus	32.52	37.44
Bra031146.1-P	Field mustard	nucleus	25.84	37.3
CDY69209	Canola	nucleus	25.84	37.3
KRH22409	Soybean	nucleus	34.74	37.23
VIT_12s0059g00280.t01	Wine grape	nucleus	38.31	36.99
AT2G20880.1	Thale cress	nucleus	27.62	36.9
KRH55997	Soybean	nucleus	32.96	36.72
KRH26929	Soybean	nucleus	34.08	36.26
KRH25541	Soybean	nucleus	32.29	35.63
Zm00001d032295_P001	Maize	nucleus	18.49	31.68
VIT_19s0014g03180.t01	Wine grape	nucleus	26.95	30.02
Zm00001d052026_P001	Maize	mitochondrion	10.02	29.22
Zm00001d018081_P001	Maize	nucleus	21.83	28.74
Zm00001d052229_P001	Maize	nucleus	20.04	28.48
Zm00001d020267_P001	Maize	nucleus	18.71	28.38
Zm00001d030513_P001	Maize	mitochondrion	17.15	28.0
Zm00001d048208_P001	Maize	nucleus	18.49	27.95
Zm00001d028017_P001	Maize	nucleus	18.26	27.33
Zm00001d045120_P001	Maize	mitochondrion	10.24	27.22
Zm00001d035835_P001	Maize	mitochondrion	10.47	27.17
Zm00001d044857_P001	Maize	nucleus	20.49	26.36
Zm00001d039077_P001	Maize	plastid	16.7	26.13
Zm00001d009622_P001	Maize	plastid	14.7	25.1
Zm00001d026486_P001	Maize	mitochondrion	9.35	24.42
Zm00001d015759_P001	Maize	nucleus	11.36	23.94
Zm00001d036889_P001	Maize	nucleus	12.03	23.48
Zm00001d046501_P001	Maize	nucleus	10.69	22.12
Zm00001d002011_P001	Maize	mitochondrion, nucleus	7.13	18.82

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	UniProt:A0A1D6HEC7	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ProteinID:AQK73004.1
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31657	PANTHER:PTHR31657:SF7
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000221E23F	EnsemblPlantsGene:Zm00001d017366	EnsemblPlants:Zm00001d017366_P001	EnsemblPlants:Zm00001d017366_T001
SEG:seg	:	:	:	:	:

Description

AP2-EREBP-transcription factor 76Ethylene-responsive transcription factor ERF053

Coordinates

chr5:-:193684947..193686296

Molecular Weight (calculated)

48042.3 Da

IEP (calculated)

9.480

GRAVY (calculated)

-0.522

Length

449 amino acids

Sequence
(BLAST)

001: MEPMGRDGGG GHGRGWKGKG VSSGSAAGRQ LAPVLEDAPA AALLRPLKKI RSPDRRLNRS LSALSSSAPP SPDSSSVSNP MSPPSTRHIF PFAYDPAPAA
101: STSTAASPRL LPLLQYGSVF QQPLPPQQPL QHQQMISFGS RQQQFGAAAA PLFPPQLVAP PEVQQQMLLL RYWSEALNLS PRGFRAGAGA GAVPPALYQQ
201: LLRAPKLYRG VRQRHWGKWV AEIRLPRNRT RLWLGTFDTA EDAAMAYDRE AFKLRGENAK LNFPDLFLGK GRVGGSGRTS ASAAVSCSSS SSSAPPTPDE
301: NHAKQAQRHD GEQPCNSEAK PLFPEAEQPN NLEHEPNSQL QSADHHGGDG STVMFQPSVA SSGMWGPAEE AWFSAWGPGS SVWDYDMDNA HGLFLQSRFA
401: SEAASMDYVS SMPEAPATPA AGTAVASAAS LSSPPPLPLP RSPTYRWKD

Best Arabidopsis Sequence Match ( AT2G20880.1 )
(BLAST)

001: MATAKNKGKS IRVLGTSEAE KKDEMELEEE FQFSSGKYKD SGPGSDMWLG DASSTSPRSL RKTRTFDRHN PYLVSSYATP QPPTTTTCSV SFPFYLPPAI
101: QNQQRFLHPN DPSGQRQQQM ISFDPQQQVQ PYVAQQQQQQ QHLLQYWRDI LKLSPSGRMM MMNMLRQESD LPLTRPPVQP FSATKLYRGV RQRHWGKWVA
201: EIRKPRNRTR LWLGTFDTAE EAAMAYDREA FKLRGETARL NFPELFLNKQ EPTPVHQKQC ETGTTSEDSS RRGEDDSSTA LAVGGVSEET GWAEAWFNAI
301: PEEWGPGSPL WDDYHFPISN HKDDLDATQN SSSDTI

Arabidopsis Description

ERF053Ethylene-responsive transcription factor ERF053 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKT1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.