Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G263800.1 | Wheat | nucleus | 95.84 | 96.48 |
| TraesCS6A01G235100.1 | Wheat | nucleus | 95.4 | 94.58 |
| HORVU6Hr1G060140.1 | Barley | nucleus, plastid | 94.53 | 78.12 |
| Os02t0638650-01 | Rice | nucleus | 74.62 | 72.09 |
| Zm00001d017366_P001 | Maize | nucleus | 65.21 | 66.37 |
| OQU85375 | Sorghum | nucleus | 67.4 | 65.81 |
| Zm00001d051239_P001 | Maize | nucleus | 61.71 | 63.37 |
| TraesCS2D01G369900.1 | Wheat | nucleus | 50.77 | 50.99 |
| GSMUA_Achr4P26080_001 | Banana | nucleus | 38.51 | 43.35 |
| Bra024222.1-P | Field mustard | nucleus | 20.79 | 41.67 |
| CDX97423 | Canola | nucleus | 25.38 | 41.58 |
| Bra010383.1-P | Field mustard | nucleus | 24.73 | 40.94 |
| CDY14255 | Canola | nucleus | 24.73 | 40.94 |
| Bra026280.1-P | Field mustard | nucleus | 25.82 | 40.27 |
| TraesCS7D01G469200.1 | Wheat | nucleus | 14.66 | 40.12 |
| AT4G28140.1 | Thale cress | nucleus | 25.6 | 40.07 |
| CDX89202 | Canola | nucleus | 25.6 | 39.93 |
| CDY19002 | Canola | nucleus | 25.6 | 39.93 |
| CDY58717 | Canola | nucleus | 22.76 | 39.85 |
| CDY29884 | Canola | nucleus | 22.32 | 39.08 |
| PGSC0003DMT400047265 | Potato | nucleus | 31.51 | 37.02 |
| VIT_12s0059g00280.t01 | Wine grape | nucleus | 37.42 | 36.77 |
| Bra031146.1-P | Field mustard | nucleus | 24.95 | 36.66 |
| CDY69209 | Canola | nucleus | 24.95 | 36.66 |
| CDX81987 | Canola | nucleus | 24.95 | 36.42 |
| KRH55997 | Soybean | nucleus | 31.95 | 36.23 |
| Solyc07g054220.1.1 | Tomato | nucleus | 30.85 | 36.15 |
| KRH25541 | Soybean | nucleus | 31.51 | 35.38 |
| KRH22409 | Soybean | nucleus | 32.39 | 35.32 |
| KRH26929 | Soybean | nucleus | 32.39 | 35.07 |
| AT2G20880.1 | Thale cress | nucleus | 25.38 | 34.52 |
| TraesCS4D01G267500.1 | Wheat | nucleus | 18.82 | 30.61 |
| TraesCS5D01G200900.2 | Wheat | nucleus | 18.82 | 30.28 |
| VIT_19s0014g03180.t01 | Wine grape | nucleus | 26.7 | 30.27 |
| TraesCS7D01G147200.1 | Wheat | mitochondrion, nucleus | 10.5 | 29.45 |
| TraesCS6D01G343800.1 | Wheat | mitochondrion | 10.94 | 29.41 |
| TraesCS2D01G503100.1 | Wheat | nucleus | 9.63 | 29.33 |
| TraesCS7D01G147100.1 | Wheat | mitochondrion, nucleus | 10.5 | 29.27 |
| TraesCS6D01G281200.1 | Wheat | nucleus | 21.01 | 28.83 |
| TraesCS2D01G503900.1 | Wheat | mitochondrion | 9.41 | 27.56 |
| TraesCS1D01G418900.1 | Wheat | plastid | 16.19 | 26.15 |
| TraesCS7D01G182700.1 | Wheat | nucleus, plastid | 20.79 | 25.96 |
| TraesCS7D01G372700.1 | Wheat | nucleus | 10.28 | 20.7 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31657 | PANTHER:PTHR31657:SF7 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS6D01G217800 | EnsemblPlants:TraesCS6D01G217800.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr6D:-:307516738..307518111
Molecular Weight (calculated)
49241.6 Da
IEP (calculated)
8.112
GRAVY (calculated)
-0.631
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAADSGGRR ERRWKGKAAS SAAEKQQQQL APVLEDAPAA ALLPPLKKMR SPDCRLRRSV SSLSSAPASP DSSSVSNPLS PPATSLPLHA SSTRQIFPFA
101: YDPSPAAAPR LLQLLRYSSS LYQQPMLPQQ LQQQQHTPSQ HPQMISFGDA QQQQQQQFEA AAALIPPQYM APEALRYWSA ALNLSPRGVL GGVVPPALYQ
201: HLLRPPGPAK LYRGVRQRHW GKWVAEIRLP RNRTRLWLGT FDTAEDAAMA YDREAFKLRG ENARLNFPDL FLGKGRSGGS GRTSASAAAS ASSSSTSAPP
301: TPDETHAQQA QLLLQREQQQ QHTDGQANTG PKPPLSAAEQ DGQPEPEQNP QLQNAEQHCS DGSTAMMQQA PVTPGGVWGP ADDAWFSAWG PGSSVWDYDM
401: DSAHGLLLQS RFAGEQAGMD YVPSAPEAHV APAAGTGTAC GAPPSPLPPR PPFMWKD
101: YDPSPAAAPR LLQLLRYSSS LYQQPMLPQQ LQQQQHTPSQ HPQMISFGDA QQQQQQQFEA AAALIPPQYM APEALRYWSA ALNLSPRGVL GGVVPPALYQ
201: HLLRPPGPAK LYRGVRQRHW GKWVAEIRLP RNRTRLWLGT FDTAEDAAMA YDREAFKLRG ENARLNFPDL FLGKGRSGGS GRTSASAAAS ASSSSTSAPP
301: TPDETHAQQA QLLLQREQQQ QHTDGQANTG PKPPLSAAEQ DGQPEPEQNP QLQNAEQHCS DGSTAMMQQA PVTPGGVWGP ADDAWFSAWG PGSSVWDYDM
401: DSAHGLLLQS RFAGEQAGMD YVPSAPEAHV APAAGTGTAC GAPPSPLPPR PPFMWKD
001: MATAKNKGKS IRVLGTSEAE KKDEMELEEE FQFSSGKYKD SGPGSDMWLG DASSTSPRSL RKTRTFDRHN PYLVSSYATP QPPTTTTCSV SFPFYLPPAI
101: QNQQRFLHPN DPSGQRQQQM ISFDPQQQVQ PYVAQQQQQQ QHLLQYWRDI LKLSPSGRMM MMNMLRQESD LPLTRPPVQP FSATKLYRGV RQRHWGKWVA
201: EIRKPRNRTR LWLGTFDTAE EAAMAYDREA FKLRGETARL NFPELFLNKQ EPTPVHQKQC ETGTTSEDSS RRGEDDSSTA LAVGGVSEET GWAEAWFNAI
301: PEEWGPGSPL WDDYHFPISN HKDDLDATQN SSSDTI
101: QNQQRFLHPN DPSGQRQQQM ISFDPQQQVQ PYVAQQQQQQ QHLLQYWRDI LKLSPSGRMM MMNMLRQESD LPLTRPPVQP FSATKLYRGV RQRHWGKWVA
201: EIRKPRNRTR LWLGTFDTAE EAAMAYDREA FKLRGETARL NFPELFLNKQ EPTPVHQKQC ETGTTSEDSS RRGEDDSSTA LAVGGVSEET GWAEAWFNAI
301: PEEWGPGSPL WDDYHFPISN HKDDLDATQN SSSDTI
Arabidopsis Description
ERF053Ethylene-responsive transcription factor ERF053 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKT1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.