Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G390800.1 | Wheat | nucleus | 96.26 | 96.48 |
| TraesCS2A01G373700.1 | Wheat | nucleus | 96.04 | 96.26 |
| Os04t0529100-01 | Rice | nucleus | 53.63 | 64.72 |
| Zm00001d025910_P001 | Maize | nucleus | 56.48 | 63.61 |
| Zm00001d002867_P001 | Maize | nucleus | 62.86 | 63.27 |
| KXG26694 | Sorghum | nucleus | 62.2 | 61.26 |
| TraesCS6D01G217800.1 | Wheat | nucleus | 50.99 | 50.77 |
| GSMUA_Achr4P26080_001 | Banana | nucleus | 37.58 | 42.12 |
| TraesCS7D01G469200.1 | Wheat | nucleus | 15.38 | 41.92 |
| Bra026280.1-P | Field mustard | nucleus | 25.71 | 39.93 |
| CDY19002 | Canola | nucleus | 25.71 | 39.93 |
| CDX89202 | Canola | nucleus | 25.49 | 39.59 |
| Bra010383.1-P | Field mustard | nucleus | 23.52 | 38.77 |
| CDX97423 | Canola | nucleus | 23.74 | 38.71 |
| AT4G28140.1 | Thale cress | nucleus | 24.84 | 38.7 |
| CDX81987 | Canola | nucleus | 26.59 | 38.66 |
| Bra024222.1-P | Field mustard | nucleus | 19.34 | 38.6 |
| Bra031146.1-P | Field mustard | nucleus | 25.93 | 37.94 |
| CDY69209 | Canola | nucleus | 25.93 | 37.94 |
| CDY14255 | Canola | nucleus | 22.86 | 37.68 |
| CDY58717 | Canola | nucleus | 21.54 | 37.55 |
| AT2G20880.1 | Thale cress | nucleus | 27.47 | 37.2 |
| CDY29884 | Canola | nucleus | 21.32 | 37.16 |
| KRH25541 | Soybean | nucleus | 32.97 | 36.85 |
| VIT_12s0059g00280.t01 | Wine grape | nucleus | 37.58 | 36.77 |
| PGSC0003DMT400047265 | Potato | nucleus | 31.21 | 36.5 |
| KRH55997 | Soybean | nucleus | 32.31 | 36.48 |
| Solyc07g054220.1.1 | Tomato | nucleus | 30.77 | 35.9 |
| KRH22409 | Soybean | nucleus | 32.09 | 34.84 |
| KRH26929 | Soybean | nucleus | 32.31 | 34.83 |
| TraesCS4D01G267500.1 | Wheat | nucleus | 18.68 | 30.25 |
| VIT_19s0014g03180.t01 | Wine grape | nucleus | 26.59 | 30.02 |
| TraesCS7D01G147200.1 | Wheat | mitochondrion, nucleus | 10.55 | 29.45 |
| TraesCS2D01G503100.1 | Wheat | nucleus | 9.67 | 29.33 |
| TraesCS7D01G147100.1 | Wheat | mitochondrion, nucleus | 10.55 | 29.27 |
| TraesCS6D01G343800.1 | Wheat | mitochondrion | 10.77 | 28.82 |
| TraesCS2D01G503900.1 | Wheat | mitochondrion | 9.67 | 28.21 |
| TraesCS5D01G200900.2 | Wheat | nucleus | 16.7 | 26.76 |
| TraesCS6D01G281200.1 | Wheat | nucleus | 19.34 | 26.43 |
| TraesCS7D01G182700.1 | Wheat | nucleus, plastid | 19.56 | 24.32 |
| TraesCS1D01G418900.1 | Wheat | plastid | 14.95 | 24.03 |
| TraesCS7D01G372700.1 | Wheat | nucleus | 10.33 | 20.7 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31657 | PANTHER:PTHR31657:SF7 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS2D01G369900 | EnsemblPlants:TraesCS2D01G369900.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr2D:+:474511836..474513203
Molecular Weight (calculated)
48878.3 Da
IEP (calculated)
9.093
GRAVY (calculated)
-0.772
Length
455 amino acids
Sequence
(BLAST)
(BLAST)
001: MDASSASGES GSGGGRGTGR RWKGKGVTPI QARRQQQLAP VFEDASAALL RPLRKIGRSP DRLHRTTSSL STSSSSAPAS PRSFPASDAA APSARHIFPF
101: AYDEPSATTA RETPQLLRQY SSMSQPASPP KQPPLRHQQM ISFGGSPPCA TQSFFMPAES AQQQQHLLRY WSEALNLSPR GGLAGMPPSL YQQLLRAPPP
201: PQKLYRGVRQ RHWGKWVAEI RLPRNRTRLW LGTFDTAEDA AMAYDREAFK LRGENARLNF PDRFLGKGRA GGSGRTSAAS SAATSAAAGT ASCSSSSSSP
301: PQTSDEAPAN PQEAPRQREQ QHAEWSTLEN QPQHPPPTTI PQDGGSRDAA TPYSAEMFHS SAPSGGMWAQ ADESWFNAWG PGSSFWDYEM DDSARSLFIH
401: HPRFSGEDAG MSHPGAQETP PATAAAGTSD TTCNDVPATS SSAPPPETHQ APNFM
101: AYDEPSATTA RETPQLLRQY SSMSQPASPP KQPPLRHQQM ISFGGSPPCA TQSFFMPAES AQQQQHLLRY WSEALNLSPR GGLAGMPPSL YQQLLRAPPP
201: PQKLYRGVRQ RHWGKWVAEI RLPRNRTRLW LGTFDTAEDA AMAYDREAFK LRGENARLNF PDRFLGKGRA GGSGRTSAAS SAATSAAAGT ASCSSSSSSP
301: PQTSDEAPAN PQEAPRQREQ QHAEWSTLEN QPQHPPPTTI PQDGGSRDAA TPYSAEMFHS SAPSGGMWAQ ADESWFNAWG PGSSFWDYEM DDSARSLFIH
401: HPRFSGEDAG MSHPGAQETP PATAAAGTSD TTCNDVPATS SSAPPPETHQ APNFM
001: MATAKNKGKS IRVLGTSEAE KKDEMELEEE FQFSSGKYKD SGPGSDMWLG DASSTSPRSL RKTRTFDRHN PYLVSSYATP QPPTTTTCSV SFPFYLPPAI
101: QNQQRFLHPN DPSGQRQQQM ISFDPQQQVQ PYVAQQQQQQ QHLLQYWRDI LKLSPSGRMM MMNMLRQESD LPLTRPPVQP FSATKLYRGV RQRHWGKWVA
201: EIRKPRNRTR LWLGTFDTAE EAAMAYDREA FKLRGETARL NFPELFLNKQ EPTPVHQKQC ETGTTSEDSS RRGEDDSSTA LAVGGVSEET GWAEAWFNAI
301: PEEWGPGSPL WDDYHFPISN HKDDLDATQN SSSDTI
101: QNQQRFLHPN DPSGQRQQQM ISFDPQQQVQ PYVAQQQQQQ QHLLQYWRDI LKLSPSGRMM MMNMLRQESD LPLTRPPVQP FSATKLYRGV RQRHWGKWVA
201: EIRKPRNRTR LWLGTFDTAE EAAMAYDREA FKLRGETARL NFPELFLNKQ EPTPVHQKQC ETGTTSEDSS RRGEDDSSTA LAVGGVSEET GWAEAWFNAI
301: PEEWGPGSPL WDDYHFPISN HKDDLDATQN SSSDTI
Arabidopsis Description
ERF053Ethylene-responsive transcription factor ERF053 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKT1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.