Factsheet for Zm00001d002867_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26694	Sorghum	nucleus	90.71	88.74
Zm00001d025910_P001	Maize	nucleus	77.65	86.88
TraesCS2A01G373700.1	Wheat	nucleus	64.6	64.32
Os04t0529100-01	Rice	nucleus	53.54	64.19
TraesCS2B01G390800.1	Wheat	nucleus	64.16	63.88
TraesCS2D01G369900.1	Wheat	nucleus	63.27	62.86
Zm00001d017366_P001	Maize	nucleus	51.33	51.67
Zm00001d051239_P001	Maize	nucleus	49.56	50.34
GSMUA_Achr4P26080_001	Banana	nucleus	37.61	41.87
Bra024222.1-P	Field mustard	nucleus	21.02	41.67
Bra026280.1-P	Field mustard	nucleus	26.77	41.3
CDX89202	Canola	nucleus	26.55	40.96
CDY19002	Canola	nucleus	26.55	40.96
CDY58717	Canola	nucleus	23.45	40.61
Bra010383.1-P	Field mustard	nucleus	24.78	40.58
AT4G28140.1	Thale cress	nucleus	26.11	40.41
CDX97423	Canola	nucleus	24.78	40.14
CDY29884	Canola	nucleus	23.01	39.85
CDY14255	Canola	nucleus	24.11	39.49
AT2G20880.1	Thale cress	nucleus	28.1	37.8
CDX81987	Canola	nucleus	25.66	37.06
PGSC0003DMT400047265	Potato	nucleus	31.42	36.5
VIT_12s0059g00280.t01	Wine grape	nucleus	37.39	36.34
CDY69209	Canola	nucleus	25.0	36.33
Bra031146.1-P	Field mustard	nucleus	25.0	36.33
Solyc07g054220.1.1	Tomato	nucleus	31.19	36.15
KRH22409	Soybean	nucleus	32.96	35.56
KRH55997	Soybean	nucleus	30.97	34.74
KRH25541	Soybean	nucleus	31.19	34.64
KRH26929	Soybean	nucleus	32.3	34.6
Zm00001d032295_P001	Maize	nucleus	17.7	30.53
VIT_19s0014g03180.t01	Wine grape	nucleus	27.21	30.52
Zm00001d052026_P001	Maize	mitochondrion	9.73	28.57
Zm00001d030513_P001	Maize	mitochondrion	16.59	27.27
Zm00001d020267_P001	Maize	nucleus	17.7	27.03
Zm00001d048208_P001	Maize	nucleus	17.7	26.94
Zm00001d045120_P001	Maize	mitochondrion	9.96	26.63
Zm00001d035835_P001	Maize	mitochondrion	10.18	26.59
Zm00001d018081_P001	Maize	nucleus	19.91	26.39
Zm00001d026486_P001	Maize	mitochondrion	9.96	26.16
Zm00001d028017_P001	Maize	nucleus	17.26	26.0
Zm00001d052229_P001	Maize	nucleus	18.14	25.95
Zm00001d009622_P001	Maize	plastid	15.04	25.86
Zm00001d044857_P001	Maize	nucleus	19.91	25.79
Zm00001d039077_P001	Maize	plastid	15.71	24.74
Zm00001d015759_P001	Maize	nucleus	9.73	20.66
Zm00001d036889_P001	Maize	nucleus	10.4	20.43
Zm00001d046501_P001	Maize	nucleus	9.07	18.89
Zm00001d002011_P001	Maize	mitochondrion, nucleus	6.64	17.65

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	UniProt:A0A060D6Q3	ProteinID:AIB05004.1	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	ProteinID:ONM15533.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31657
PANTHER:PTHR31657:SF7	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000221FC80	EnsemblPlantsGene:Zm00001d002867	EnsemblPlants:Zm00001d002867_P001
EnsemblPlants:Zm00001d002867_T001	SEG:seg	:	:	:	:

Description

AP2-EREBP-transcription factor 154Ethylene-responsive transcription factor ERF053

Coordinates

chr2:+:25029642..25031000

Molecular Weight (calculated)

48129.7 Da

IEP (calculated)

9.280

GRAVY (calculated)

-0.714

Length

452 amino acids

Sequence
(BLAST)

001: MDASSESGGA GGGRGGRRWK GKGVTPIQPR RTQLAPVMED ASAALLRPLK KIGRAPDRFQ RSASSLSTTS SSAPPSPRSS AAGATSPASL SPPSARHMFP
101: FAYEPSAPLG GAPRLELPPP WQHSPSVSQP ASPQQQQQQQ AQAPVQRQQQ MISFGAPPQY QAQFLLPEGA QQQQHLLRYW SEALNLSPRG GQAAGVLPSL
201: YQHLLRPPPP QKLYRGVRQR HWGKWVAEIR LPRNRTRLWL GTFDSAEDAA MAYDREAFKL RGENARLNFP DRFFGKGYAG GSGRTSATPA AAPTAAAASG
301: STSSSSPPQT PDDPSTQQTP PDAERSLDKQ PQPPVATSSQ LEGSSGEPTL ADSGQMIHSP EPPAGSDWGP ADEAWLNAWG PGSSFWDYDI DSTRGLFLHH
401: GRFAGDEAGI NTATTAAATG TDMPCDHVPV TPASSSSPLH SQSPHSPSFM DH

Best Arabidopsis Sequence Match ( AT2G20880.1 )
(BLAST)

001: MATAKNKGKS IRVLGTSEAE KKDEMELEEE FQFSSGKYKD SGPGSDMWLG DASSTSPRSL RKTRTFDRHN PYLVSSYATP QPPTTTTCSV SFPFYLPPAI
101: QNQQRFLHPN DPSGQRQQQM ISFDPQQQVQ PYVAQQQQQQ QHLLQYWRDI LKLSPSGRMM MMNMLRQESD LPLTRPPVQP FSATKLYRGV RQRHWGKWVA
201: EIRKPRNRTR LWLGTFDTAE EAAMAYDREA FKLRGETARL NFPELFLNKQ EPTPVHQKQC ETGTTSEDSS RRGEDDSSTA LAVGGVSEET GWAEAWFNAI
301: PEEWGPGSPL WDDYHFPISN HKDDLDATQN SSSDTI

Arabidopsis Description

ERF053Ethylene-responsive transcription factor ERF053 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKT1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.