Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P05210_001 | Banana | nucleus | 56.09 | 70.88 |
| Zm00001d046501_P001 | Maize | nucleus | 64.35 | 68.2 |
| CDY36551 | Canola | nucleus | 53.04 | 66.3 |
| CDX83982 | Canola | nucleus | 52.17 | 66.3 |
| CDX96845 | Canola | nucleus | 52.17 | 66.3 |
| CDY39637 | Canola | nucleus | 53.04 | 63.87 |
| Zm00001d015759_P001 | Maize | nucleus | 59.13 | 63.85 |
| EER90018 | Sorghum | nucleus | 65.22 | 63.83 |
| TraesCS7B01G277800.1 | Wheat | nucleus | 61.3 | 62.67 |
| TraesCS7D01G372700.1 | Wheat | nucleus | 61.74 | 62.56 |
| TraesCS7A01G376300.1 | Wheat | nucleus | 61.74 | 62.56 |
| AT1G15360.1 | Thale cress | nucleus | 53.48 | 61.81 |
| Bra026140.1-P | Field mustard | nucleus | 52.61 | 61.11 |
| Bra016663.1-P | Field mustard | nucleus | 52.61 | 60.5 |
| Os06t0604000-02 | Rice | nucleus | 63.91 | 60.49 |
| CDY67940 | Canola | nucleus | 49.13 | 59.47 |
| PGSC0003DMT400001703 | Potato | nucleus | 52.61 | 58.74 |
| Solyc03g116610.2.1 | Tomato | nucleus | 51.3 | 58.42 |
| Bra026770.1-P | Field mustard | nucleus | 41.3 | 55.56 |
| Zm00001d052026_P001 | Maize | mitochondrion | 27.83 | 41.56 |
| Zm00001d045120_P001 | Maize | mitochondrion | 28.7 | 39.05 |
| Zm00001d035835_P001 | Maize | mitochondrion | 29.13 | 38.73 |
| Zm00001d026486_P001 | Maize | mitochondrion | 28.7 | 38.37 |
| Zm00001d002011_P001 | Maize | mitochondrion, nucleus | 26.09 | 35.29 |
| Zm00001d032295_P001 | Maize | nucleus | 22.61 | 19.85 |
| Zm00001d028017_P001 | Maize | nucleus | 22.61 | 17.33 |
| Zm00001d009622_P001 | Maize | plastid | 19.57 | 17.11 |
| Zm00001d030513_P001 | Maize | mitochondrion | 20.43 | 17.09 |
| Zm00001d020267_P001 | Maize | nucleus | 21.74 | 16.89 |
| Zm00001d048208_P001 | Maize | nucleus | 21.3 | 16.5 |
| Zm00001d052229_P001 | Maize | nucleus | 22.61 | 16.46 |
| Zm00001d039077_P001 | Maize | plastid | 20.43 | 16.38 |
| Zm00001d018081_P001 | Maize | nucleus | 22.17 | 14.96 |
| Zm00001d044857_P001 | Maize | nucleus | 20.0 | 13.18 |
| Zm00001d017366_P001 | Maize | nucleus | 23.48 | 12.03 |
| Zm00001d051239_P001 | Maize | nucleus | 22.17 | 11.46 |
| Zm00001d025910_P001 | Maize | nucleus | 20.0 | 11.39 |
| Zm00001d002867_P001 | Maize | nucleus | 20.43 | 10.4 |
Protein Annotations
| EntrezGene:103629778 | MapMan:15.5.7.1 | MapMan:21.9.3.1 | Gene3D:3.30.730.10 | UniProt:A0A1D6LSA3 | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | ProteinID:AQK82330.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31194 | PANTHER:PTHR31194:SF12 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000220AF4C | EnsemblPlantsGene:Zm00001d036889 |
| EnsemblPlants:Zm00001d036889_P001 | EnsemblPlants:Zm00001d036889_T001 | SEG:seg | : | : | : |
Description
AP2-EREBP-transcription factor 145Putative AP2/EREBP transcription factor superfamily protein
Coordinates
chr6:+:105660981..105662401
Molecular Weight (calculated)
23825.2 Da
IEP (calculated)
10.473
GRAVY (calculated)
-0.297
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQQSKKKKF RGVRQRHWGS WVSEIRHPLL KRRVWLGTFD TAEEAARAYD EAAVLMSGRN AKTNFPVVPC GRTRGGGGGA SSGNNTNASA SASASTSTSS
101: LSQSQVLSAK LRRCCKAPSP SLTCLRLDPE RSHIGVWHKG AGARADSSWV MTVQLSDKDA APAPSATSST ATTATAASPP PVVVVDDEER IALQMIEELL
201: GGGGGGGPVS HPHGNGGMLQ IAAAGGGLVI
101: LSQSQVLSAK LRRCCKAPSP SLTCLRLDPE RSHIGVWHKG AGARADSSWV MTVQLSDKDA APAPSATSST ATTATAASPP PVVVVDDEER IALQMIEELL
201: GGGGGGGPVS HPHGNGGMLQ IAAAGGGLVI
001: MVQTKKFRGV RQRHWGSWVA EIRHPLLKRR IWLGTFETAE EAARAYDEAA VLMSGRNAKT NFPLNNNNTG ETSEGKTDIS ASSTMSSSTS SSSLSSILSA
101: KLRKCCKSPS PSLTCLRLDT ASSHIGVWQK RAGSKSDSSW VMTVELGPAS SSQETTSKAS QDAILAPTTE VEIGGSREEV LDEEEKVALQ MIEELLNTN
101: KLRKCCKSPS PSLTCLRLDT ASSHIGVWQK RAGSKSDSSW VMTVELGPAS SSQETTSKAS QDAILAPTTE VEIGGSREEV LDEEEKVALQ MIEELLNTN
Arabidopsis Description
WIN1Ethylene-responsive transcription factor WIN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI33]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.