Factsheet for Zm00001d048208_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92713	Sorghum	nucleus	89.9	84.23
Zm00001d028017_P001	Maize	nucleus	84.51	83.67
Os03t0191900-01	Rice	nucleus	70.37	70.37
TraesCS4B01G268100.1	Wheat	nucleus	61.62	69.32
TraesCS4A01G035400.2	Wheat	nucleus	64.65	68.33
TraesCS4D01G267500.1	Wheat	nucleus	63.64	67.26
HORVU4Hr1G071890.3	Barley	nucleus	50.51	54.35
Zm00001d030513_P001	Maize	mitochondrion	46.8	50.55
Zm00001d032295_P001	Maize	nucleus	40.07	45.42
Zm00001d020267_P001	Maize	nucleus	44.11	44.26
Zm00001d052229_P001	Maize	nucleus	45.79	43.04
GSMUA_Achr3P04360_001	Banana	nucleus	36.03	42.8
Zm00001d018081_P001	Maize	nucleus	46.46	40.47
Zm00001d044857_P001	Maize	nucleus	44.44	37.82
AT1G36060.1	Thale cress	nucleus	38.38	36.31
CDX73367	Canola	nucleus	38.05	35.2
Zm00001d052026_P001	Maize	mitochondrion	18.18	35.06
Bra040381.1-P	Field mustard	nucleus	37.71	34.89
CDY48227	Canola	nucleus	37.71	34.89
Zm00001d045120_P001	Maize	mitochondrion	18.52	32.54
Zm00001d035835_P001	Maize	mitochondrion	18.52	31.79
Zm00001d026486_P001	Maize	mitochondrion	16.84	29.07
Zm00001d009622_P001	Maize	plastid	23.57	26.62
Zm00001d039077_P001	Maize	plastid	25.25	26.13
Zm00001d015759_P001	Maize	nucleus	16.5	23.0
Zm00001d002011_P001	Maize	mitochondrion, nucleus	12.79	22.35
Zm00001d046501_P001	Maize	nucleus	16.16	22.12
Zm00001d036889_P001	Maize	nucleus	16.5	21.3
Zm00001d051239_P001	Maize	nucleus	28.62	19.1
Zm00001d017366_P001	Maize	nucleus	27.95	18.49
Zm00001d025910_P001	Maize	nucleus	24.58	18.07
Zm00001d002867_P001	Maize	nucleus	26.94	17.7

Protein Annotations

EntrezGene:100274117	MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ProteinID:AQL09129.1
UniProt:B4FZ51	EMBL:BT042389	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EMBL:KJ727550	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31657	PANTHER:PTHR31657:SF18	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00017B7849
EnsemblPlantsGene:Zm00001d048208	EnsemblPlants:Zm00001d048208_P001	EnsemblPlants:Zm00001d048208_T001	SEG:seg	:	:

Description

AP2-EREBP-transcription factor 71Ethylene-responsive transcription factor ERF055

Coordinates

chr9:+:152517945..152518838

Molecular Weight (calculated)

31699.3 Da

IEP (calculated)

8.013

GRAVY (calculated)

-0.298

Length

297 amino acids

Sequence
(BLAST)

001: MAATTIDWHG RNAALYGVPD SKELVRALAP PMQQAPTISF AYPCPGVEQQ SQCAAAGSFL GAGGLTPAQL LQVQSRLRFL RRPAAAGGAA QPMKRQGVPQ
101: QAPLPARPAV SKLYRGVRQR HWGKWVAEIR LPRNRTRLWL GTFDTAEEAA LAYDGAAFRL RGDSARLNFP ELRRGGQHLG PPLHAAVDAK LHAICSGADV
201: GAPLPQGQSQ SHATAAATTA TPSPFSSVSP HVKSEPGCSV SESSFSADGD VSSTGSSDVV PEMQLLDFSE APWDESDSFH LRKYPSLEID WDSILIS

Best Arabidopsis Sequence Match ( AT1G78080.1 )
(BLAST)

001: MAAAMNLYTC SRSFQDSGGE LMDALVPFIK SVSDSPSSSS AASASAFLHP SAFSLPPLPG YYPDSTFLTQ PFSYGSDLQQ TGSLIGLNNL SSSQIHQIQS
101: QIHHPLPPTH HNNNNSFSNL LSPKPLLMKQ SGVAGSCFAY GSGVPSKPTK LYRGVRQRHW GKWVAEIRLP RNRTRLWLGT FDTAEEAALA YDKAAYKLRG
201: DFARLNFPNL RHNGSHIGGD FGEYKPLHSS VDAKLEAICK SMAETQKQDK STKSSKKREK KVSSPDLSEK VKAEENSVSI GGSPPVTEFE ESTAGSSPLS
301: DLTFADPEEP PQWNETFSLE KYPSYEIDWD SILA

Arabidopsis Description

RAP2-4Ethylene-responsive transcription factor RAP2-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.