Factsheet for AT1G36060.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73367	Canola	nucleus	78.66	76.95
CDY48227	Canola	nucleus	78.34	76.64
Bra040381.1-P	Field mustard	nucleus	78.34	76.64
TraesCS7D01G469200.1	Wheat	nucleus	25.16	47.31
AT1G22190.1	Thale cress	nucleus	38.53	46.36
GSMUA_Achr3P04360_001	Banana	nucleus	35.35	44.4
AT1G78080.1	Thale cress	nucleus	43.95	41.32
GSMUA_Achr6P10440_001	Banana	nucleus	34.08	41.0
GSMUA_Achr10P...	Banana	nucleus	35.99	40.5
TraesCS4B01G268100.1	Wheat	nucleus	33.44	39.77
Zm00001d032295_P001	Maize	nucleus	32.48	38.93
TraesCS4D01G267500.1	Wheat	nucleus	34.71	38.79
TraesCS4A01G035400.2	Wheat	nucleus	34.71	38.79
EES13814	Sorghum	nucleus	33.44	38.75
Zm00001d052229_P001	Maize	nucleus	38.85	38.61
Os08t0408500-01	Rice	nucleus	34.39	38.57
Zm00001d048208_P001	Maize	nucleus	36.31	38.38
Os03t0191900-01	Rice	nucleus	36.31	38.38
HORVU5Hr1G058270.1	Barley	nucleus	34.39	38.16
Zm00001d028017_P001	Maize	nucleus	36.31	38.0
TraesCS5D01G200900.2	Wheat	nucleus	34.08	37.68
Zm00001d020267_P001	Maize	nucleus	35.35	37.5
AT4G39780.1	Thale cress	nucleus	32.48	37.5
TraesCS5B01G193200.1	Wheat	nucleus	33.76	37.32
AT5G65130.2	Thale cress	nucleus	33.12	37.28
EES07235	Sorghum	nucleus	38.85	36.86
Os02t0752800-01	Rice	nucleus	39.49	36.69
HORVU6Hr1G074970.1	Barley	nucleus	38.53	36.67
GSMUA_Achr3P01650_001	Banana	nucleus	38.53	36.67
Zm00001d018081_P001	Maize	nucleus	39.81	36.66
TraesCS6A01G301900.1	Wheat	nucleus	38.22	36.59
KXG35507	Sorghum	nucleus	35.35	36.51
TraesCS6B01G331000.1	Wheat	nucleus	38.53	36.34
EER92713	Sorghum	nucleus	36.62	36.28
TraesCS6D01G281200.1	Wheat	nucleus	38.22	36.04
HORVU6Hr1G060220.1	Barley	nucleus	28.03	35.63
HORVU4Hr1G071890.3	Barley	nucleus	30.25	34.42
AT2G22200.1	Thale cress	plastid	28.34	34.1
TraesCS7B01G085900.1	Wheat	nucleus, plastid	39.81	33.97
TraesCS7A01G180900.1	Wheat	nucleus, plastid	38.85	33.7
TraesCS7D01G182700.1	Wheat	nucleus, plastid	39.17	33.61
Zm00001d044857_P001	Maize	nucleus	37.26	33.52
Zm00001d030513_P001	Maize	mitochondrion	28.98	33.09
HORVU7Hr1G037180.1	Barley	nucleus, plastid	38.85	32.88
EER89448	Sorghum	nucleus	38.22	32.7
GSMUA_Achr9P12950_001	Banana	nucleus	34.71	32.15
AT5G25190.1	Thale cress	mitochondrion	16.24	28.18
AT5G25390.2	Thale cress	nucleus	16.56	27.51
AT1G15360.1	Thale cress	nucleus	16.88	26.63
Os10t0371100-00	Rice	nucleus	29.94	26.11
AT5G11190.1	Thale cress	mitochondrion, nucleus	15.29	25.4
AT4G28140.1	Thale cress	nucleus	23.25	25.0
AT1G64380.1	Thale cress	nucleus	26.11	24.48
AT2G20880.1	Thale cress	nucleus	23.89	22.32
AT4G13620.1	Thale cress	nucleus	22.93	18.56

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	EntrezGene:840510	ProteinID:AAF18648.1	ProteinID:AAG52316.1	ProteinID:AEE31842.1
EMBL:AK228415	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ArrayExpress:AT1G36060	EnsemblPlantsGene:AT1G36060	RefSeq:AT1G36060
TAIR:AT1G36060	RefSeq:AT1G36060-TAIR-G	EnsemblPlants:AT1G36060.1	TAIR:AT1G36060.1	Unigene:At.39425	EMBL:BT005758
EMBL:BT006078	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009415	GO:GO:0009628	GO:GO:0009719	GO:GO:0009873	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	RefSeq:NP_564468.1	PFAM:PF00847	PO:PO:0007611	PO:PO:0009005
PO:PO:0009046	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31657	PANTHER:PTHR31657:SF9	UniProt:Q9SKW5
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000000C722	SEG:seg	:	:

Description

ERF055Ethylene-responsive transcription factor ERF055 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKW5]

Coordinates

chr1:-:13454496..13456336

Molecular Weight (calculated)

34309.4 Da

IEP (calculated)

5.614

GRAVY (calculated)

-0.687

Length

314 amino acids

Sequence
(BLAST)

001: MADLFGGGHG GELMEALQPF YKSASTSASN PAFASSNDAF ASAPNDLFSS SSYYNPHASL FPSHSTTSYP DIYSGSMTYP SSFGSDLQQP ENYQSQFHYQ
101: NTITYTHQDN NTCMLNFIEP SQPGFMTQPG PSSGSVSKPA KLYRGVRQRH WGKWVAEIRL PRNRTRLWLG TFDTAEEAAL AYDRAAFKLR GDSARLNFPA
201: LRYQTGSSPS DTGEYGPIQA AVDAKLEAIL AEPKNQPGKT ERTSRKRAKA AASSAEQPSA PQQHSGSGES DGSGSPTSDV MVQEMCQEPE MPWNENFMLG
301: KCPSYEIDWA SILS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.