Factsheet for HORVU6Hr1G074970.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G301900.1	Wheat	nucleus	92.42	92.99
TraesCS6B01G331000.1	Wheat	nucleus	92.73	91.89
TraesCS6D01G281200.1	Wheat	nucleus	92.42	91.59
Os02t0752800-01	Rice	nucleus	79.7	77.81
EES07235	Sorghum	nucleus	76.36	76.13
Zm00001d052229_P001	Maize	nucleus	72.42	75.63
Zm00001d018081_P001	Maize	nucleus	77.27	74.78
HORVU7Hr1G037180.1	Barley	nucleus, plastid	62.42	55.53
GSMUA_Achr3P04360_001	Banana	nucleus	39.39	52.0
HORVU5Hr1G058270.1	Barley	nucleus	40.0	46.64
HORVU6Hr1G060220.1	Barley	nucleus	30.91	41.3
Bra040381.1-P	Field mustard	nucleus	38.18	39.25
CDY48227	Canola	nucleus	38.18	39.25
CDX73367	Canola	nucleus	37.58	38.63
AT1G36060.1	Thale cress	nucleus	36.67	38.53
HORVU4Hr1G071890.3	Barley	nucleus	30.61	36.59
HORVU1Hr1G090250.1	Barley	plastid	22.12	24.66
HORVU6Hr1G038120.3	Barley	nucleus	15.15	24.27
HORVU7Hr1G029870.1	Barley	mitochondrion	13.33	18.57
HORVU6Hr1G060140.1	Barley	nucleus, plastid	29.09	17.36
HORVU7Hr1G089930.7	Barley	nucleus, plastid	11.52	13.92

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	UniProt:A0A287UPZ3	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU6Hr1G074970	EnsemblPlants:HORVU6Hr1G074970.1
InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31657
PANTHER:PTHR31657:SF21	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000B489251	SEG:seg	:

Description

No Description!

Coordinates

chrchr6H:+:517270501..517273811

Molecular Weight (calculated)

35546.5 Da

IEP (calculated)

6.682

GRAVY (calculated)

-0.448

Length

330 amino acids

Sequence
(BLAST)

001: MAAAIDMYKY NPATHQIGSA SDQELMKALE PFITGASSSS YPYPYQYQYY SSPSMTQDSY TATPSSSSSY ASFAAPPLPT TAPFSQLPPL YSSSSQYAVN
101: NGSMGLAQLG PAQIQQIQAQ FFVQQQQQRG LAGGSFLGPR AQPMKQSGSP PPRASAAALA LAGVAPAQSK LYRGVRQRHW GKWVAEIRLP KNRTRLWLGT
201: FDTAEDAALA YDKAAFRLRG DLARLNFPSL RRGGAHLAGP LHASVDAKLT AICQSLAAPS SKNSAEAEPE PESPKCSAST EGEDSVSAGS PPPVPEMEKL
301: DFTEAPWDES ETFHLRKYPS VEIDWDSILS

Best Arabidopsis Sequence Match ( AT1G78080.1 )
(BLAST)

001: MAAAMNLYTC SRSFQDSGGE LMDALVPFIK SVSDSPSSSS AASASAFLHP SAFSLPPLPG YYPDSTFLTQ PFSYGSDLQQ TGSLIGLNNL SSSQIHQIQS
101: QIHHPLPPTH HNNNNSFSNL LSPKPLLMKQ SGVAGSCFAY GSGVPSKPTK LYRGVRQRHW GKWVAEIRLP RNRTRLWLGT FDTAEEAALA YDKAAYKLRG
201: DFARLNFPNL RHNGSHIGGD FGEYKPLHSS VDAKLEAICK SMAETQKQDK STKSSKKREK KVSSPDLSEK VKAEENSVSI GGSPPVTEFE ESTAGSSPLS
301: DLTFADPEEP PQWNETFSLE KYPSYEIDWD SILA

Arabidopsis Description

RAP2-4Ethylene-responsive transcription factor RAP2-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.