Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G200900.2 | Wheat | nucleus | 98.59 | 98.24 |
| TraesCS5B01G193200.1 | Wheat | nucleus | 97.17 | 96.83 |
| HORVU6Hr1G060220.1 | Barley | nucleus | 67.49 | 77.33 |
| KXG35507 | Sorghum | nucleus | 79.51 | 74.01 |
| Zm00001d020267_P001 | Maize | nucleus | 75.62 | 72.3 |
| GSMUA_Achr9P12950_001 | Banana | nucleus | 50.88 | 42.48 |
| HORVU6Hr1G074970.1 | Barley | nucleus | 46.64 | 40.0 |
| HORVU7Hr1G037180.1 | Barley | nucleus, plastid | 50.88 | 38.81 |
| HORVU4Hr1G071890.3 | Barley | nucleus | 36.75 | 37.68 |
| CDX73367 | Canola | nucleus | 39.22 | 34.58 |
| AT1G36060.1 | Thale cress | nucleus | 38.16 | 34.39 |
| CDY48227 | Canola | nucleus | 38.52 | 33.96 |
| Bra040381.1-P | Field mustard | nucleus | 38.52 | 33.96 |
| HORVU1Hr1G090250.1 | Barley | plastid | 25.09 | 23.99 |
| HORVU6Hr1G038120.3 | Barley | nucleus | 16.96 | 23.3 |
| HORVU7Hr1G029870.1 | Barley | mitochondrion | 15.9 | 18.99 |
| HORVU6Hr1G060140.1 | Barley | nucleus, plastid | 30.39 | 15.55 |
| HORVU7Hr1G089930.7 | Barley | nucleus, plastid | 12.72 | 13.19 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | UniProt:A0A287RDE9 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU5Hr1G058270 | EnsemblPlants:HORVU5Hr1G058270.1 |
| InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31657 |
| PANTHER:PTHR31657:SF16 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0003E7461E | SEG:seg | : |
Description
No Description!
Coordinates
chrchr5H:+:455726168..455729070
Molecular Weight (calculated)
30467.3 Da
IEP (calculated)
6.961
GRAVY (calculated)
-0.545
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAIDLSGE DLVRALEPFI REASAPPPLH SHPSPTSPFS FPHAAYSGYP YGVQAQAQTE LSPAQMHYIQ ARLHLQRQTG QPGHLGPRPQ PMKPASAAAA
101: TPPRPQKLYR GVRQRHWGKW VAEIRLPRNR TRLWLGTFDT AEEAALAYDQ AAYRLRGDAA RLNFPDNAAS RGPLHASVDA KLQTLCQNIT ASKNAKKSAS
201: VSASTAAATS STPTSNCSSP SSDEASSSLE SAESSPSPTT TAAEVPEMQQ LDFSEAPWDE AAGFALTKYP SYEIDWDSLL ATN
101: TPPRPQKLYR GVRQRHWGKW VAEIRLPRNR TRLWLGTFDT AEEAALAYDQ AAYRLRGDAA RLNFPDNAAS RGPLHASVDA KLQTLCQNIT ASKNAKKSAS
201: VSASTAAATS STPTSNCSSP SSDEASSSLE SAESSPSPTT TAAEVPEMQQ LDFSEAPWDE AAGFALTKYP SYEIDWDSLL ATN
001: MAAIDMFNSN TDPFQEELMK ALQPYTTNTD SSSPTYSNTV FGFNQTTSLG LNQLTPYQIH QIQNQLNQRR NIISPNLAPK PVPMKNMTAQ KLYRGVRQRH
101: WGKWVAEIRL PKNRTRLWLG TFDTAEEAAM AYDLAAYKLR GEFARLNFPQ FRHEDGYYGG GSCFNPLHSS VDAKLQEICQ SLRKTEDIDL PCSETELFPP
201: KTEYQESEYG FLRSDENSFS DESHVESSSP ESGITTFLDF SDSGFDEIGS FGLEKFPSVE IDWDAISKLS ES
101: WGKWVAEIRL PKNRTRLWLG TFDTAEEAAM AYDLAAYKLR GEFARLNFPQ FRHEDGYYGG GSCFNPLHSS VDAKLQEICQ SLRKTEDIDL PCSETELFPP
201: KTEYQESEYG FLRSDENSFS DESHVESSSP ESGITTFLDF SDSGFDEIGS FGLEKFPSVE IDWDAISKLS ES
Arabidopsis Description
ERF060Ethylene-responsive transcription factor ERF060 [Source:UniProtKB/Swiss-Prot;Acc:O65665]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.