Factsheet for HORVU1Hr1G090250.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G418900.1	Wheat	plastid	90.2	94.35
TraesCS1B01G441300.1	Wheat	plastid	87.5	91.84
TraesCS1A01G411100.1	Wheat	plastid	88.18	91.58
Os05t0572000-00	Rice	nucleus	70.95	76.92
EES19973	Sorghum	plastid	71.62	70.2
Zm00001d039077_P001	Maize	plastid	65.88	67.94
Zm00001d009622_P001	Maize	plastid	59.8	67.3
GSMUA_Achr5P09470_001	Banana	nucleus	42.57	50.4
GSMUA_Achr1P27990_001	Banana	nucleus	39.86	47.58
VIT_02s0025g01360.t01	Wine grape	nucleus	33.11	37.12
CDY71425	Canola	nucleus	36.49	36.86
CDY46525	Canola	nucleus	35.47	36.71
Solyc08g082210.2.1	Tomato	nucleus	32.43	36.36
CDY47850	Canola	nucleus	36.82	35.74
Bra027736.1-P	Field mustard	nucleus	36.15	35.08
PGSC0003DMT400031685	Potato	nucleus	34.8	35.03
Bra027697.1-P	Field mustard	nucleus	36.49	34.95
KRH77640	Soybean	nucleus	36.15	34.08
AT1G64380.1	Thale cress	nucleus	37.84	33.43
PGSC0003DMT400014953	Potato	nucleus	35.14	33.33
KRH27850	Soybean	nucleus	35.47	32.31
HORVU6Hr1G060220.1	Barley	nucleus	22.3	26.72
CDY08372	Canola	nucleus	20.61	25.96
HORVU5Hr1G058270.1	Barley	nucleus	23.99	25.09
HORVU4Hr1G071890.3	Barley	nucleus	21.96	23.55
HORVU6Hr1G074970.1	Barley	nucleus	24.66	22.12
HORVU6Hr1G038120.3	Barley	nucleus	15.2	21.84
HORVU7Hr1G037180.1	Barley	nucleus, plastid	24.32	19.41
HORVU7Hr1G029870.1	Barley	mitochondrion	12.16	15.19
HORVU6Hr1G060140.1	Barley	nucleus, plastid	25.0	13.38
HORVU7Hr1G089930.7	Barley	nucleus, plastid	11.49	12.45

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	EMBL:AK371729	EMBL:AK374132	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ncoils:Coil	InterPro:DNA-bd_dom_sf	UniProt:F2E6F5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009719	GO:GO:0009987	GO:GO:0010200	EnsemblPlantsGene:HORVU1Hr1G090250	EnsemblPlants:HORVU1Hr1G090250.1	InterPro:IPR001471
InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31657	PANTHER:PTHR31657:SF20
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002007DD0	SEG:seg	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E6F5]

Coordinates

chrchr1H:-:545610907..545613711

Molecular Weight (calculated)

32017.5 Da

IEP (calculated)

9.730

GRAVY (calculated)

-0.387

Length

296 amino acids

Sequence
(BLAST)

001: MDASLRTLSP SSFTGEVRSA VSSLLLSPGG ASALDTVFSH LPPPVTIPPL GSSVYYRQSE LLRTFAATHH QASAAAATSS SSGYAVPFPF PGAAAHDAAA
101: AAAHDAAAAA AAGRKMYRGV RQRQWGKWVA EIRLPQNRVR VWLGTYDSPE TAAHAYDRAA YRLRGEYARL NFPGVMDGAD DARFPDALRH LRDAVDAKIQ
201: AIRVRMARKR ARARRLREES KQQQQQNNTQ RAEAAPVAPT APRPVVSESA TTSETTTTTT SSYGSPEGVL SAADFECSLQ QMPSFDPELI WEMLNF

Best Arabidopsis Sequence Match ( AT1G64380.1 )
(BLAST)

001: MEESNDIFQN NFSPKISEIR ASLSQIILAG GPNTLDSIFS LLTPSSVESA TTSFNTHNPP PPPQLGSSVY LRQRDIIEKF HLQNRAISTP HPPLFSSTYD
101: HHQTSELMLQ AAAGSPAAAF AAALAAGRVT KKKKLYRGVR QRHWGKWVAE IRLPQNRMRV WLGTYDTAEA AAYAYDRAAY KLRGEYARLN FPNLKDPSEL
201: LGLGDSSKLI ALKNAVDGKI QSICQRVRKE RAKKSVKVSK NSSATADSSC LSSPEILSSS PVTTTTTAVT SEDSYWVSPM GLCNSENSSP VSVSVPSEVP
301: ATAEEEAMMG VDTDGFLLAR MPSFDPELIW EVLAN

Arabidopsis Description

ERF061Ethylene-responsive transcription factor ERF061 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7W2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.