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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 3
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G263800.1 Wheat nucleus 77.76 94.71
TraesCS6D01G217800.1 Wheat nucleus 78.12 94.53
TraesCS6A01G235100.1 Wheat nucleus 78.12 93.71
Os02t0638650-01 Rice nucleus 61.66 72.09
OQU85375 Sorghum nucleus 56.42 66.67
Zm00001d017366_P001 Maize nucleus 53.71 66.15
Zm00001d051239_P001 Maize nucleus 51.18 63.6
GSMUA_Achr4P26080_001 Banana nucleus 32.01 43.6
Bra024222.1-P Field mustard nucleus 17.0 41.23
CDX97423 Canola nucleus 20.8 41.22
Bra010383.1-P Field mustard nucleus 20.07 40.22
CDY14255 Canola nucleus 20.07 40.22
Bra026280.1-P Field mustard nucleus 21.16 39.93
AT4G28140.1 Thale cress nucleus 20.98 39.73
CDX89202 Canola nucleus 20.98 39.59
CDY19002 Canola nucleus 20.98 39.59
CDY58717 Canola nucleus 18.63 39.46
CDY29884 Canola nucleus 18.26 38.7
VIT_12s0059g00280.t01 Wine grape nucleus 31.1 36.99
CDY69209 Canola nucleus 20.61 36.66
Bra031146.1-P Field mustard nucleus 20.61 36.66
CDX81987 Canola nucleus 20.61 36.42
PGSC0003DMT400047265 Potato nucleus 25.5 36.25
KRH55997 Soybean nucleus 26.4 36.23
KRH22409 Soybean nucleus 26.94 35.56
KRH25541 Soybean nucleus 26.04 35.38
Solyc07g054220.1.1 Tomato nucleus 24.77 35.13
KRH26929 Soybean nucleus 26.76 35.07
AT2G20880.1 Thale cress nucleus 20.8 34.23
HORVU5Hr1G058270.1 Barley nucleus 15.55 30.39
HORVU6Hr1G060220.1 Barley nucleus 13.56 30.36
VIT_19s0014g03180.t01 Wine grape nucleus 22.06 30.27
HORVU6Hr1G074970.1 Barley nucleus 17.36 29.09
HORVU4Hr1G071890.3 Barley nucleus 13.74 27.54
HORVU7Hr1G037180.1 Barley nucleus, plastid 17.36 25.88
HORVU1Hr1G090250.1 Barley plastid 13.38 25.0
HORVU6Hr1G038120.3 Barley nucleus 9.04 24.27
HORVU7Hr1G029870.1 Barley mitochondrion 8.14 18.99
HORVU7Hr1G089930.7 Barley nucleus, plastid 6.51 13.19
Protein Annotations
MapMan:15.5.7.2Gene3D:3.30.730.10UniProt:A0A287UCC6InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfncoils:Coil
InterPro:DNA-bd_dom_sfGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:HORVU6Hr1G060140
EnsemblPlants:HORVU6Hr1G060140.1InterPro:IPR001471InterPro:IPR036955PFAM:PF00847PRINTS:PR00367PFscan:PS51032
PANTHER:PTHR31657PANTHER:PTHR31657:SF7SMART:SM00380SUPFAM:SSF54171UniParc:UPI000B47DE59SEG:seg
Description
No Description!
Coordinates
chrchr6H:+:398810937..398813371
Molecular Weight (calculated)
59943.0 Da
IEP (calculated)
10.231
GRAVY (calculated)
-0.488
Length
553 amino acids
Sequence
(BLAST)
001: PFSFSPAWNI PELPKNIWPA HLYKPVAAGR SLQIRSEPRA PLAHLLPRAR APRSFSRSLV RFVRELLGLV WYCLRRAAAA GLKFSRRVRA IGRVAGMDAA
101: DSGGGVRGRE RRWKGKAASS AAEKQQQQPL APVLEDAPAA ALLPPLKKMR SPDCRLRRSV SSLSSAPASP DSSSVSNPLS PPATSLPPYA SSTRQIFPFA
201: YDPSPAAAPR LLQLLQYSSS LYQQPMLPQQ QQHTPSQHPQ MISFGDAQQQ QQFEAAAALV PPQYMSPEAL RYWSAALNLS PRGVLGGVVP PALYQHLLRP
301: PGPAKLYRGV RQRHWGKWVA EIRLPRNRTR LWLGTFDTAE DAAMAYDREA FKLRGENARL NFPDLFLGKG RSGGSGRTSA SAAASASSSS SKSAPPTPEE
401: THAQQAQLLL QREQKQHMDE QANVVGPKPL LSAAEQDGLP EPEQNPQLQN AEQQCSDGST AMMQQAPATP GGVWGPADDA WFSAWGPGSS VWDYDMDSAH
501: GLLLQSRFAG EQAGMDYVPS APEAHMAPAA GTGTACAAPP SPLPPRPPFM WKD
Best Arabidopsis Sequence Match ( AT2G20880.1 )
(BLAST)
001: MATAKNKGKS IRVLGTSEAE KKDEMELEEE FQFSSGKYKD SGPGSDMWLG DASSTSPRSL RKTRTFDRHN PYLVSSYATP QPPTTTTCSV SFPFYLPPAI
101: QNQQRFLHPN DPSGQRQQQM ISFDPQQQVQ PYVAQQQQQQ QHLLQYWRDI LKLSPSGRMM MMNMLRQESD LPLTRPPVQP FSATKLYRGV RQRHWGKWVA
201: EIRKPRNRTR LWLGTFDTAE EAAMAYDREA FKLRGETARL NFPELFLNKQ EPTPVHQKQC ETGTTSEDSS RRGEDDSSTA LAVGGVSEET GWAEAWFNAI
301: PEEWGPGSPL WDDYHFPISN HKDDLDATQN SSSDTI
Arabidopsis Description
ERF053Ethylene-responsive transcription factor ERF053 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKT1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.