Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G038120.3 | Barley | nucleus | 51.65 | 68.45 |
| KRH47461 | Soybean | nucleus | 39.93 | 57.67 |
| KRH44444 | Soybean | nucleus | 39.93 | 54.5 |
| HORVU7Hr1G029870.1 | Barley | mitochondrion | 13.19 | 15.19 |
| HORVU6Hr1G060220.1 | Barley | nucleus | 13.19 | 14.57 |
| HORVU4Hr1G071890.3 | Barley | nucleus | 13.19 | 13.04 |
| HORVU5Hr1G058270.1 | Barley | nucleus | 13.19 | 12.72 |
| HORVU6Hr1G074970.1 | Barley | nucleus | 13.92 | 11.52 |
| HORVU1Hr1G090250.1 | Barley | plastid | 12.45 | 11.49 |
| HORVU7Hr1G037180.1 | Barley | nucleus, plastid | 13.55 | 9.97 |
| HORVU6Hr1G060140.1 | Barley | nucleus, plastid | 13.19 | 6.51 |
Protein Annotations
| MapMan:21.9.3.1 | Gene3D:3.30.730.10 | UniProt:A0A287X9E1 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU7Hr1G089930 | EnsemblPlants:HORVU7Hr1G089930.7 |
| InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF12 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000B478956 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr7H:-:546587362..546588478
Molecular Weight (calculated)
28703.8 Da
IEP (calculated)
9.757
GRAVY (calculated)
-0.319
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: AGLTLTHSLT RTAPHCLLII PSLRSARPPP CQRENLARSA FRRETSWYSP RRSFAASGSA TGAPGSPRSG ILSWKRRVWL GTFETAEEAA RAYDEAAILM
101: SGRNAKTNFP VPRSANGEII VAPAAAARDI RGGVGSSSSG AAGASSLSQI LSAKLRKCCK TPSPSLTCLR LDTEKSHIGV WQKRAGARAD SSWVMTVELN
201: KEPAAAAPPT PSDSTVSATP SSSTSTSTTG SPPEAMEDEE RIALQMIEEL LSRSSPASPS HGLLHGEEGS LLI
101: SGRNAKTNFP VPRSANGEII VAPAAAARDI RGGVGSSSSG AAGASSLSQI LSAKLRKCCK TPSPSLTCLR LDTEKSHIGV WQKRAGARAD SSWVMTVELN
201: KEPAAAAPPT PSDSTVSATP SSSTSTSTTG SPPEAMEDEE RIALQMIEEL LSRSSPASPS HGLLHGEEGS LLI
001: MVQTKKFRGV RQRHWGSWVA EIRHPLLKRR IWLGTFETAE EAARAYDEAA VLMSGRNAKT NFPLNNNNTG ETSEGKTDIS ASSTMSSSTS SSSLSSILSA
101: KLRKCCKSPS PSLTCLRLDT ASSHIGVWQK RAGSKSDSSW VMTVELGPAS SSQETTSKAS QDAILAPTTE VEIGGSREEV LDEEEKVALQ MIEELLNTN
101: KLRKCCKSPS PSLTCLRLDT ASSHIGVWQK RAGSKSDSSW VMTVELGPAS SSQETTSKAS QDAILAPTTE VEIGGSREEV LDEEEKVALQ MIEELLNTN
Arabidopsis Description
WIN1Ethylene-responsive transcription factor WIN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI33]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.