Factsheet for HORVU7Hr1G037180.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G180900.1	Wheat	nucleus, plastid	90.3	92.54
TraesCS7B01G085900.1	Wheat	nucleus, plastid	91.64	92.39
TraesCS7D01G182700.1	Wheat	nucleus, plastid	90.03	91.26
Zm00001d044857_P001	Maize	nucleus	65.23	69.34
EER89448	Sorghum	nucleus	67.66	68.39
HORVU6Hr1G074970.1	Barley	nucleus	55.53	62.42
GSMUA_Achr3P04360_001	Banana	nucleus	35.04	52.0
HORVU5Hr1G058270.1	Barley	nucleus	38.81	50.88
HORVU6Hr1G060220.1	Barley	nucleus	29.11	43.72
AT1G36060.1	Thale cress	nucleus	32.88	38.85
CDX73367	Canola	nucleus	33.15	38.32
Bra040381.1-P	Field mustard	nucleus	32.61	37.69
CDY48227	Canola	nucleus	32.61	37.69
HORVU4Hr1G071890.3	Barley	nucleus	27.22	36.59
HORVU1Hr1G090250.1	Barley	plastid	19.41	24.32
HORVU6Hr1G038120.3	Barley	nucleus	12.94	23.3
HORVU7Hr1G029870.1	Barley	mitochondrion	12.4	19.41
HORVU6Hr1G060140.1	Barley	nucleus, plastid	25.88	17.36
HORVU7Hr1G089930.7	Barley	nucleus, plastid	9.97	13.55

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	UniProt:A0A287W2G3	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU7Hr1G037180	EnsemblPlants:HORVU7Hr1G037180.1
InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31657
PANTHER:PTHR31657:SF21	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000B488F63	SEG:seg	:

Description

No Description!

Coordinates

chrchr7H:-:88671189..88673490

Molecular Weight (calculated)

39656.5 Da

IEP (calculated)

6.907

GRAVY (calculated)

-0.533

Length

371 amino acids

Sequence
(BLAST)

001: MAAIDLYGAA NQLSSSSSSS SSDQELMRAL EPFIRSASSP TSSTSTSTSP FSYHAASTST STSSPFSYYS CYSTQPQESC YLPASSSYSY TTLQAPFAPA
101: TSSFSQLPPL PPTSQYSTSP PSATYPSPSA GDAVGLASLG PEQIHQIQAQ LYLQQQQQQQ QRGLSASFLG PRAQPMKQAG APSASAAGKL YRGVRQRHWG
201: KWVAEIRLPK NRTRLWLGTF DTAEDAALAY DKAAFRLRGD AARLNFPNLR RGGAHLAGPL HASVNAKLDS ICQNIATAPS SKSAPPDSPK ASTSTTSTEG
301: DYGSVLSAGS TPLPPPPQSS QHQHQQPAAP LHEMANLDFS EAPWDESDAF HLHQDLHKCP SWEIDWDSIL S

Best Arabidopsis Sequence Match ( AT1G78080.1 )
(BLAST)

001: MAAAMNLYTC SRSFQDSGGE LMDALVPFIK SVSDSPSSSS AASASAFLHP SAFSLPPLPG YYPDSTFLTQ PFSYGSDLQQ TGSLIGLNNL SSSQIHQIQS
101: QIHHPLPPTH HNNNNSFSNL LSPKPLLMKQ SGVAGSCFAY GSGVPSKPTK LYRGVRQRHW GKWVAEIRLP RNRTRLWLGT FDTAEEAALA YDKAAYKLRG
201: DFARLNFPNL RHNGSHIGGD FGEYKPLHSS VDAKLEAICK SMAETQKQDK STKSSKKREK KVSSPDLSEK VKAEENSVSI GGSPPVTEFE ESTAGSSPLS
301: DLTFADPEEP PQWNETFSLE KYPSYEIDWD SILA

Arabidopsis Description

RAP2-4Ethylene-responsive transcription factor RAP2-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.