Factsheet for Zm00001d044857_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89448	Sorghum	nucleus	87.11	82.83
HORVU7Hr1G037180.1	Barley	nucleus, plastid	69.34	65.23
Zm00001d052229_P001	Maize	nucleus	59.03	65.19
TraesCS7A01G180900.1	Wheat	nucleus, plastid	67.05	64.64
TraesCS7D01G182700.1	Wheat	nucleus, plastid	67.34	64.21
TraesCS7B01G085900.1	Wheat	nucleus, plastid	67.34	63.86
Zm00001d018081_P001	Maize	nucleus	60.74	62.17
GSMUA_Achr3P04360_001	Banana	nucleus	34.38	48.0
Zm00001d032295_P001	Maize	nucleus	33.81	45.04
Zm00001d020267_P001	Maize	nucleus	37.82	44.59
Zm00001d048208_P001	Maize	nucleus	37.82	44.44
Zm00001d028017_P001	Maize	nucleus	37.25	43.33
Zm00001d030513_P001	Maize	mitochondrion	32.09	40.73
AT1G36060.1	Thale cress	nucleus	33.52	37.26
CDX73367	Canola	nucleus	33.52	36.45
Bra040381.1-P	Field mustard	nucleus	33.24	36.14
CDY48227	Canola	nucleus	33.24	36.14
Zm00001d052026_P001	Maize	mitochondrion	13.75	31.17
Zm00001d045120_P001	Maize	mitochondrion	14.9	30.77
Zm00001d009622_P001	Maize	plastid	20.92	27.76
Zm00001d035835_P001	Maize	mitochondrion	13.75	27.75
Zm00001d026486_P001	Maize	mitochondrion	13.47	27.33
Zm00001d039077_P001	Maize	plastid	20.63	25.09
Zm00001d002011_P001	Maize	mitochondrion, nucleus	11.17	22.94
Zm00001d015759_P001	Maize	nucleus	13.18	21.6
Zm00001d046501_P001	Maize	nucleus	12.89	20.74
Zm00001d025910_P001	Maize	nucleus	23.78	20.54
Zm00001d017366_P001	Maize	nucleus	26.36	20.49
Zm00001d051239_P001	Maize	nucleus	25.79	20.22
Zm00001d036889_P001	Maize	nucleus	13.18	20.0
Zm00001d002867_P001	Maize	nucleus	25.79	19.91

Protein Annotations

EntrezGene:103637851	MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ProteinID:AQL01022.1
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	UniProt:K7W500	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31657
PANTHER:PTHR31657:SF21	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00022086CC	EnsemblPlantsGene:Zm00001d044857	EnsemblPlants:Zm00001d044857_P001
EnsemblPlants:Zm00001d044857_T001	SEG:seg	:	:	:	:

Description

AP2-EREBP-transcription factor 31Putative AP2/EREBP transcription factor superfamily protein

Coordinates

chr9:-:5518177..5519226

Molecular Weight (calculated)

37130.0 Da

IEP (calculated)

6.797

GRAVY (calculated)

-0.381

Length

349 amino acids

Sequence
(BLAST)

001: MATTDLYTGQ LSFSSSSSSD QELMKALEPF IRSASSPTSS TTSPFSYSSY SYPYSSVLPQ DSYYLPATSS YTALPPPPLA PTATSFSQLP PLPQSSSSYA
101: SPASSSCPTS SVDAASGLAL NHLGPAQIHQ IHSQLLAQRR QQHQRGQLAA AFLGPQAQPM KHAGAPPLAA AKLYRGVRQR HWGKWVAEIR LPRNRTRLWL
201: GTFDSAEDAA LAYDKAAFRL RGDAARLNFP SLRRGGAHLA GPLDASVDAK LTAICQGITA EPTSKAAAAA PSDSPKASAS TTTTEGDESV HSAGSPPSLP
301: TFPQQQQQVT PPLPEMASLD FTEAPWDESA ALHLNSYPSW DIDWDSILS

Best Arabidopsis Sequence Match ( AT1G78080.1 )
(BLAST)

001: MAAAMNLYTC SRSFQDSGGE LMDALVPFIK SVSDSPSSSS AASASAFLHP SAFSLPPLPG YYPDSTFLTQ PFSYGSDLQQ TGSLIGLNNL SSSQIHQIQS
101: QIHHPLPPTH HNNNNSFSNL LSPKPLLMKQ SGVAGSCFAY GSGVPSKPTK LYRGVRQRHW GKWVAEIRLP RNRTRLWLGT FDTAEEAALA YDKAAYKLRG
201: DFARLNFPNL RHNGSHIGGD FGEYKPLHSS VDAKLEAICK SMAETQKQDK STKSSKKREK KVSSPDLSEK VKAEENSVSI GGSPPVTEFE ESTAGSSPLS
301: DLTFADPEEP PQWNETFSLE KYPSYEIDWD SILA

Arabidopsis Description

RAP2-4Ethylene-responsive transcription factor RAP2-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.