Factsheet for TraesCS7A01G180900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G182700.1	Wheat	nucleus, plastid	95.86	94.81
TraesCS7B01G085900.1	Wheat	nucleus, plastid	95.03	93.48
HORVU7Hr1G037180.1	Barley	nucleus, plastid	92.54	90.3
Zm00001d044857_P001	Maize	nucleus	64.64	67.05
EER89448	Sorghum	nucleus	67.13	66.21
TraesCS6A01G301900.1	Wheat	nucleus	57.46	63.41
GSMUA_Achr3P04360_001	Banana	nucleus	35.36	51.2
TraesCS4A01G035400.2	Wheat	nucleus	33.15	42.7
AT1G36060.1	Thale cress	nucleus	33.7	38.85
CDX73367	Canola	nucleus	33.98	38.32
CDY48227	Canola	nucleus	33.43	37.69
Bra040381.1-P	Field mustard	nucleus	33.43	37.69
TraesCS2A01G503100.1	Wheat	mitochondrion	13.54	31.21
TraesCS7A01G145800.1	Wheat	mitochondrion, nucleus	14.09	30.72
TraesCS6A01G360300.1	Wheat	mitochondrion	13.81	30.12
TraesCS1A01G411100.1	Wheat	plastid	20.17	25.61
TraesCS6A01G181400.2	Wheat	nucleus	13.26	23.19
TraesCS7A01G376300.1	Wheat	nucleus	13.26	21.15
TraesCS6A01G235100.1	Wheat	nucleus	25.41	19.96
TraesCS2A01G373700.1	Wheat	nucleus	24.86	19.82

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31657	PANTHER:PTHR31657:SF21	SMART:SM00380
SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS7A01G180900	EnsemblPlants:TraesCS7A01G180900.1	TIGR:cd00018	SEG:seg	:

Description

No Description!

Coordinates

chr7A:-:135689082..135690238

Molecular Weight (calculated)

38473.3 Da

IEP (calculated)

7.015

GRAVY (calculated)

-0.433

Length

362 amino acids

Sequence
(BLAST)

001: MAAIDLYGAA NQFSSSSSSS SSDQELMRAL EPFIRSASSP TSSTSTSTSP FSFYATSTSA STSSPFSYYN SSPLPQESCY FPASSSYSYT TLQAPFAPAA
101: PATTSSSFSQ LPPLPPTSQY SASPAAAYPS AGDAVGLASL GPEQIHQIQA QLFLQQQQQQ QRGFSASLLG PRAQPMKQAG ASAAGKLYRG VRQRHWGKWV
201: AEIRLPKNRT RLWLGTFDTA EDAALAYDKA AFRLRGDAAR LNFPNLRRGG AHLAGPLHAS VNAKLDSICQ NIAAAPSSKS APPDSPKAST STSSTEGDGS
301: VLSAGSTPLP PPPQHQQPAA PLHEMAKLDF SEAPWDESDA FHLHQDLHKC PSWEIDWDSI LS

Best Arabidopsis Sequence Match ( AT1G22190.1 )
(BLAST)

001: MTTSMDFYSN KTFQQSDPFG GELMEALLPF IKSPSNDSSA FAFSLPAPIS YGSDLHSFSH HLSPKPVSMK QTGTSAAKPT KLYRGVRQRH WGKWVAEIRL
101: PRNRTRLWLG TFDTAEEAAL AYDKAAYKLR GDFARLNFPD LRHNDEYQPL QSSVDAKLEA ICQNLAETTQ KQVRSTKKSS SRKRSSTVAV KLPEEDYSSA
201: GSSPLLTESY GSGGSSSPLS ELTFGDTEEE IQPPWNENAL EKYPSYEIDW DSILQCSSLV N

Arabidopsis Description

RAP2-13Ethylene-responsive transcription factor RAP2-13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM15]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.