Factsheet for TraesCS2A01G373700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G390800.1	Wheat	nucleus	96.48	96.48
TraesCS2D01G369900.1	Wheat	nucleus	96.26	96.04
Os04t0529100-01	Rice	nucleus	55.29	66.58
Zm00001d025910_P001	Maize	nucleus	57.71	64.85
Zm00001d002867_P001	Maize	nucleus	64.32	64.6
KXG26694	Sorghum	nucleus	63.66	62.55
TraesCS6A01G235100.1	Wheat	nucleus	51.1	50.33
GSMUA_Achr4P26080_001	Banana	nucleus	38.11	42.61
CDY19002	Canola	nucleus	26.21	40.61
Bra026280.1-P	Field mustard	nucleus	26.21	40.61
CDX89202	Canola	nucleus	25.99	40.27
Bra024222.1-P	Field mustard	nucleus	20.04	39.91
Bra010383.1-P	Field mustard	nucleus	24.23	39.86
CDX97423	Canola	nucleus	24.45	39.78
AT4G28140.1	Thale cress	nucleus	25.33	39.38
CDX81987	Canola	nucleus	27.09	39.3
CDY14255	Canola	nucleus	23.57	38.77
CDY58717	Canola	nucleus	22.25	38.7
Bra031146.1-P	Field mustard	nucleus	26.43	38.59
CDY69209	Canola	nucleus	26.43	38.59
CDY29884	Canola	nucleus	22.03	38.31
AT2G20880.1	Thale cress	nucleus	27.75	37.5
KRH25541	Soybean	nucleus	33.48	37.35
KRH55997	Soybean	nucleus	33.04	37.22
VIT_12s0059g00280.t01	Wine grape	nucleus	37.89	36.99
PGSC0003DMT400047265	Potato	nucleus	31.06	36.25
Solyc07g054220.1.1	Tomato	nucleus	30.62	35.64
KRH26929	Soybean	nucleus	33.04	35.55
KRH22409	Soybean	nucleus	32.6	35.32
VIT_19s0014g03180.t01	Wine grape	nucleus	26.87	30.27
TraesCS4A01G035400.2	Wheat	nucleus	18.72	30.25
TraesCS6A01G360300.1	Wheat	mitochondrion	10.79	29.52
TraesCS7A01G145800.1	Wheat	mitochondrion, nucleus	10.79	29.52
TraesCS2A01G503100.1	Wheat	mitochondrion	9.69	28.03
TraesCS6A01G301900.1	Wheat	nucleus	19.82	27.44
TraesCS7A01G180900.1	Wheat	nucleus, plastid	19.82	24.86
TraesCS1A01G411100.1	Wheat	plastid	15.42	24.56
TraesCS6A01G181400.2	Wheat	nucleus	10.57	23.19
TraesCS7A01G376300.1	Wheat	nucleus	10.35	20.7

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31657	PANTHER:PTHR31657:SF7	SMART:SM00380
SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS2A01G373700	EnsemblPlants:TraesCS2A01G373700.1	TIGR:cd00018	SEG:seg	:

Description

No Description!

Coordinates

chr2A:+:616992163..616993535

Molecular Weight (calculated)

48897.3 Da

IEP (calculated)

9.366

GRAVY (calculated)

-0.761

Length

454 amino acids

Sequence
(BLAST)

001: MDASSASGES GSGGGRGTGR RWKGKGVTPI QARRQQQLAP VFEDASAALL RPLRKIGRSP DRLHRTTSSL STSSSSAPAS PRSFPASDAV APSARHIFPF
101: AYEPSATTAR ESPQLLRQYS SMSQPASPPP QQPLRHQQMI SFGGSPPCAT QSFFMPAEST QQQQHLLRYW SEALNLSPRG GLAGMPPSLY QQLLRAPPPP
201: QKLYRGVRQR HWGKWVAEIR LPRNRTRLWL GTFDTAEDAA MAYDREAFKL RGENARLNFP DRFLGKGRAG GSGRTSATSS AAPSAAAGTA SCSSSSSSPP
301: QTSDEAPANT QQAPRQREQQ HAEWSTLENR AQHPPPTSIP QDGGSRDAAT PYSAEMFHSS APSGGMWAQA DESWFNAWGP GSSFWDYDMD DSARSLFIHH
401: PRFSGEDAGM SHPGAQETPP ATAAAGTSDT TCDDVPVTSS SVPPPETHQT PNFM

Best Arabidopsis Sequence Match ( AT2G20880.1 )
(BLAST)

001: MATAKNKGKS IRVLGTSEAE KKDEMELEEE FQFSSGKYKD SGPGSDMWLG DASSTSPRSL RKTRTFDRHN PYLVSSYATP QPPTTTTCSV SFPFYLPPAI
101: QNQQRFLHPN DPSGQRQQQM ISFDPQQQVQ PYVAQQQQQQ QHLLQYWRDI LKLSPSGRMM MMNMLRQESD LPLTRPPVQP FSATKLYRGV RQRHWGKWVA
201: EIRKPRNRTR LWLGTFDTAE EAAMAYDREA FKLRGETARL NFPELFLNKQ EPTPVHQKQC ETGTTSEDSS RRGEDDSSTA LAVGGVSEET GWAEAWFNAI
301: PEEWGPGSPL WDDYHFPISN HKDDLDATQN SSSDTI

Arabidopsis Description

ERF053Ethylene-responsive transcription factor ERF053 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKT1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.