Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81987 | Canola | nucleus | 67.86 | 72.84 |
| CDY69209 | Canola | nucleus | 66.67 | 72.03 |
| Bra031146.1-P | Field mustard | nucleus | 66.67 | 72.03 |
| AT4G28140.1 | Thale cress | nucleus | 45.83 | 52.74 |
| KRH55997 | Soybean | nucleus | 40.48 | 33.75 |
| KRH25541 | Soybean | nucleus | 40.77 | 33.66 |
| PGSC0003DMT400047265 | Potato | nucleus | 38.69 | 33.42 |
| KRH22409 | Soybean | nucleus | 41.67 | 33.41 |
| KRH26929 | Soybean | nucleus | 41.96 | 33.41 |
| VIT_12s0059g00280.t01 | Wine grape | nucleus | 46.13 | 33.33 |
| Solyc07g054220.1.1 | Tomato | nucleus | 38.1 | 32.82 |
| Zm00001d025910_P001 | Maize | nucleus | 35.71 | 29.7 |
| Os04t0529100-01 | Rice | nucleus | 32.74 | 29.18 |
| GSMUA_Achr4P26080_001 | Banana | nucleus | 35.12 | 29.06 |
| Zm00001d002867_P001 | Maize | nucleus | 37.8 | 28.1 |
| TraesCS2A01G373700.1 | Wheat | nucleus | 37.5 | 27.75 |
| Zm00001d051239_P001 | Maize | nucleus | 36.61 | 27.64 |
| Zm00001d017366_P001 | Maize | nucleus | 36.9 | 27.62 |
| TraesCS2D01G369900.1 | Wheat | nucleus | 37.2 | 27.47 |
| TraesCS2B01G390800.1 | Wheat | nucleus | 36.9 | 27.31 |
| KXG26694 | Sorghum | nucleus | 37.5 | 27.27 |
| AT4G39780.1 | Thale cress | nucleus | 21.73 | 26.84 |
| OQU85375 | Sorghum | nucleus | 36.61 | 26.28 |
| Os02t0638650-01 | Rice | nucleus | 36.61 | 26.0 |
| TraesCS6B01G263800.1 | Wheat | nucleus | 34.52 | 25.55 |
| TraesCS6D01G217800.1 | Wheat | nucleus | 34.52 | 25.38 |
| AT1G22190.1 | Thale cress | nucleus | 19.35 | 24.9 |
| VIT_19s0014g03180.t01 | Wine grape | nucleus | 29.76 | 24.81 |
| TraesCS6A01G235100.1 | Wheat | nucleus | 33.93 | 24.73 |
| AT2G22200.1 | Thale cress | plastid | 19.05 | 24.52 |
| AT5G65130.2 | Thale cress | nucleus | 19.94 | 24.01 |
| AT1G36060.1 | Thale cress | nucleus | 22.32 | 23.89 |
| AT5G25190.1 | Thale cress | mitochondrion | 12.5 | 23.2 |
| AT1G78080.1 | Thale cress | nucleus | 22.92 | 23.05 |
| AT5G11190.1 | Thale cress | mitochondrion, nucleus | 12.5 | 22.22 |
| AT5G25390.2 | Thale cress | nucleus | 12.5 | 22.22 |
| AT1G15360.1 | Thale cress | nucleus | 13.1 | 22.11 |
| HORVU6Hr1G060140.1 | Barley | nucleus, plastid | 34.23 | 20.8 |
| AT1G64380.1 | Thale cress | nucleus | 19.64 | 19.7 |
| AT4G13620.1 | Thale cress | nucleus | 19.94 | 17.27 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | EntrezGene:816622 | ProteinID:AAD20907.1 | ProteinID:AEC07091.1 | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | ArrayExpress:AT2G20880 | EnsemblPlantsGene:AT2G20880 | RefSeq:AT2G20880 | TAIR:AT2G20880 | RefSeq:AT2G20880-TAIR-G |
| EnsemblPlants:AT2G20880.1 | TAIR:AT2G20880.1 | EMBL:AY062843 | EMBL:AY081659 | Unigene:At.27216 | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009719 | GO:GO:0009873 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0045893 | GO:GO:1900036 | GO:GO:2000070 | InterPro:IPR001471 |
| InterPro:IPR036955 | RefSeq:NP_179685.1 | PFAM:PF00847 | PO:PO:0000293 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009029 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31657 | PANTHER:PTHR31657:SF19 | UniProt:Q9SKT1 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000009FA1A | SEG:seg | : | : |
Description
ERF053Ethylene-responsive transcription factor ERF053 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKT1]
Coordinates
chr2:+:8985959..8987302
Molecular Weight (calculated)
38399.7 Da
IEP (calculated)
6.413
GRAVY (calculated)
-0.927
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAKNKGKS IRVLGTSEAE KKDEMELEEE FQFSSGKYKD SGPGSDMWLG DASSTSPRSL RKTRTFDRHN PYLVSSYATP QPPTTTTCSV SFPFYLPPAI
101: QNQQRFLHPN DPSGQRQQQM ISFDPQQQVQ PYVAQQQQQQ QHLLQYWRDI LKLSPSGRMM MMNMLRQESD LPLTRPPVQP FSATKLYRGV RQRHWGKWVA
201: EIRKPRNRTR LWLGTFDTAE EAAMAYDREA FKLRGETARL NFPELFLNKQ EPTPVHQKQC ETGTTSEDSS RRGEDDSSTA LAVGGVSEET GWAEAWFNAI
301: PEEWGPGSPL WDDYHFPISN HKDDLDATQN SSSDTI
101: QNQQRFLHPN DPSGQRQQQM ISFDPQQQVQ PYVAQQQQQQ QHLLQYWRDI LKLSPSGRMM MMNMLRQESD LPLTRPPVQP FSATKLYRGV RQRHWGKWVA
201: EIRKPRNRTR LWLGTFDTAE EAAMAYDREA FKLRGETARL NFPELFLNKQ EPTPVHQKQC ETGTTSEDSS RRGEDDSSTA LAVGGVSEET GWAEAWFNAI
301: PEEWGPGSPL WDDYHFPISN HKDDLDATQN SSSDTI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.