Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G263800.1 | Wheat | nucleus | 95.23 | 96.7 |
| TraesCS6D01G217800.1 | Wheat | nucleus | 94.58 | 95.4 |
| HORVU6Hr1G060140.1 | Barley | nucleus, plastid | 93.71 | 78.12 |
| Os02t0638650-01 | Rice | nucleus | 72.89 | 71.04 |
| OQU85375 | Sorghum | nucleus | 67.25 | 66.24 |
| Zm00001d017366_P001 | Maize | nucleus | 63.34 | 65.03 |
| Zm00001d051239_P001 | Maize | nucleus | 60.3 | 62.47 |
| TraesCS2A01G373700.1 | Wheat | nucleus | 50.33 | 51.1 |
| GSMUA_Achr4P26080_001 | Banana | nucleus | 37.53 | 42.61 |
| Bra024222.1-P | Field mustard | nucleus | 19.96 | 40.35 |
| CDX97423 | Canola | nucleus | 24.08 | 39.78 |
| CDY14255 | Canola | nucleus | 23.43 | 39.13 |
| Bra010383.1-P | Field mustard | nucleus | 23.43 | 39.13 |
| CDY58717 | Canola | nucleus | 21.91 | 38.7 |
| Bra026280.1-P | Field mustard | nucleus | 24.51 | 38.57 |
| AT4G28140.1 | Thale cress | nucleus | 24.3 | 38.36 |
| CDY19002 | Canola | nucleus | 24.3 | 38.23 |
| CDX89202 | Canola | nucleus | 24.3 | 38.23 |
| CDY29884 | Canola | nucleus | 21.48 | 37.93 |
| KRH55997 | Soybean | nucleus | 31.45 | 35.98 |
| VIT_12s0059g00280.t01 | Wine grape | nucleus | 36.23 | 35.91 |
| PGSC0003DMT400047265 | Potato | nucleus | 30.15 | 35.73 |
| Solyc07g054220.1.1 | Tomato | nucleus | 29.93 | 35.38 |
| Bra031146.1-P | Field mustard | nucleus | 23.86 | 35.37 |
| CDY69209 | Canola | nucleus | 23.86 | 35.37 |
| CDX81987 | Canola | nucleus | 23.86 | 35.14 |
| KRH25541 | Soybean | nucleus | 31.02 | 35.14 |
| KRH22409 | Soybean | nucleus | 31.45 | 34.61 |
| KRH26929 | Soybean | nucleus | 31.24 | 34.12 |
| AT2G20880.1 | Thale cress | nucleus | 24.73 | 33.93 |
| VIT_19s0014g03180.t01 | Wine grape | nucleus | 26.68 | 30.52 |
| TraesCS4A01G035400.2 | Wheat | nucleus | 18.0 | 29.54 |
| TraesCS6A01G360300.1 | Wheat | mitochondrion | 10.63 | 29.52 |
| TraesCS6A01G301900.1 | Wheat | nucleus | 20.82 | 29.27 |
| TraesCS7A01G145800.1 | Wheat | mitochondrion, nucleus | 10.41 | 28.92 |
| TraesCS2A01G503100.1 | Wheat | mitochondrion | 9.33 | 27.39 |
| TraesCS1A01G411100.1 | Wheat | plastid | 16.05 | 25.96 |
| TraesCS7A01G180900.1 | Wheat | nucleus, plastid | 19.96 | 25.41 |
| TraesCS6A01G181400.2 | Wheat | nucleus | 10.41 | 23.19 |
| TraesCS7A01G376300.1 | Wheat | nucleus | 9.98 | 20.26 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31657 | PANTHER:PTHR31657:SF7 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS6A01G235100 | EnsemblPlants:TraesCS6A01G235100.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr6A:-:444673823..444675208
Molecular Weight (calculated)
49744.4 Da
IEP (calculated)
8.454
GRAVY (calculated)
-0.596
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVADSGGGV RGRERRWKGK AASSAAEKQQ QQQLAPVLED APAAALLPPL KKMRSPDCRL RRSVSSLSSA PASPDSSSVS NPLSPPATSL PPHVSSTRQI
101: LPFAYDPSPA AAPRLLQLLR YSSSLYQQPM LPQQLQQQQQ QHTPSQHPQM ISFGDAQQQQ QLEAAAALIP PHYMAPEALR YWSAALNLSP RGVLGGVVPP
201: ALYQHLLRPP GPAKLYRGVR QRHWGKWVAE IRLPRNRTRM WLGTFDTAED AAMAYDREAF KLRGENARLN FPDLFLGKGR SGGSGRTSAS AAASASSSST
301: SAPPTPDETH AQQAQLLLQR EQQQQHTDEQ ANIRQKPLLS AAEQGGLPEP EQNPQLQNAE QQCSDGSTAM MQQAPVTPGG VWGPADDAWF SAWGPGSSVW
401: DYDMDSAHGL LLQSRFAGDQ AGMDYVPTAP EAHVAPAAGT GTACAAPPSP LPPRPPFMWK D
101: LPFAYDPSPA AAPRLLQLLR YSSSLYQQPM LPQQLQQQQQ QHTPSQHPQM ISFGDAQQQQ QLEAAAALIP PHYMAPEALR YWSAALNLSP RGVLGGVVPP
201: ALYQHLLRPP GPAKLYRGVR QRHWGKWVAE IRLPRNRTRM WLGTFDTAED AAMAYDREAF KLRGENARLN FPDLFLGKGR SGGSGRTSAS AAASASSSST
301: SAPPTPDETH AQQAQLLLQR EQQQQHTDEQ ANIRQKPLLS AAEQGGLPEP EQNPQLQNAE QQCSDGSTAM MQQAPVTPGG VWGPADDAWF SAWGPGSSVW
401: DYDMDSAHGL LLQSRFAGDQ AGMDYVPTAP EAHVAPAAGT GTACAAPPSP LPPRPPFMWK D
001: MATAKNKGKS IRVLGTSEAE KKDEMELEEE FQFSSGKYKD SGPGSDMWLG DASSTSPRSL RKTRTFDRHN PYLVSSYATP QPPTTTTCSV SFPFYLPPAI
101: QNQQRFLHPN DPSGQRQQQM ISFDPQQQVQ PYVAQQQQQQ QHLLQYWRDI LKLSPSGRMM MMNMLRQESD LPLTRPPVQP FSATKLYRGV RQRHWGKWVA
201: EIRKPRNRTR LWLGTFDTAE EAAMAYDREA FKLRGETARL NFPELFLNKQ EPTPVHQKQC ETGTTSEDSS RRGEDDSSTA LAVGGVSEET GWAEAWFNAI
301: PEEWGPGSPL WDDYHFPISN HKDDLDATQN SSSDTI
101: QNQQRFLHPN DPSGQRQQQM ISFDPQQQVQ PYVAQQQQQQ QHLLQYWRDI LKLSPSGRMM MMNMLRQESD LPLTRPPVQP FSATKLYRGV RQRHWGKWVA
201: EIRKPRNRTR LWLGTFDTAE EAAMAYDREA FKLRGETARL NFPELFLNKQ EPTPVHQKQC ETGTTSEDSS RRGEDDSSTA LAVGGVSEET GWAEAWFNAI
301: PEEWGPGSPL WDDYHFPISN HKDDLDATQN SSSDTI
Arabidopsis Description
ERF053Ethylene-responsive transcription factor ERF053 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKT1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.