Factsheet for VIT_19s0014g03180.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0043g00510.t01	Wine grape	mitochondrion, nucleus	6.45	59.09
Bra024222.1-P	Field mustard	nucleus	21.59	38.16
Bra010383.1-P	Field mustard	nucleus	25.81	37.68
CDY14255	Canola	nucleus	25.31	36.96
CDX97423	Canola	nucleus	25.31	36.56
CDY19002	Canola	nucleus	26.05	35.84
Bra026280.1-P	Field mustard	nucleus	25.81	35.49
CDX89202	Canola	nucleus	25.81	35.49
AT4G28140.1	Thale cress	nucleus	25.56	35.27
CDY58717	Canola	nucleus	22.58	34.87
CDY29884	Canola	nucleus	22.33	34.48
VIT_00s0662g00030.t01	Wine grape	nucleus	19.35	34.06
PGSC0003DMT400047265	Potato	nucleus	31.02	32.13
KRH25541	Soybean	nucleus	32.01	31.7
Solyc07g054220.1.1	Tomato	nucleus	30.27	31.28
KRH22409	Soybean	nucleus	32.51	31.26
KRH55997	Soybean	nucleus	31.02	31.02
VIT_12s0059g00280.t01	Wine grape	nucleus	35.48	30.75
KRH26929	Soybean	nucleus	31.76	30.33
AT2G20880.1	Thale cress	nucleus	24.81	29.76
Os04t0529100-01	Rice	nucleus	27.79	29.71
Bra031146.1-P	Field mustard	nucleus	22.83	29.58
CDY69209	Canola	nucleus	22.83	29.58
CDX81987	Canola	nucleus	22.83	29.39
GSMUA_Achr4P26080_001	Banana	nucleus	29.28	29.06
Zm00001d025910_P001	Maize	nucleus	28.29	28.22
VIT_18s0001g05250.t01	Wine grape	nucleus	25.31	27.79
Zm00001d051239_P001	Maize	nucleus	30.27	27.42
TraesCS6B01G263800.1	Wheat	nucleus	30.77	27.31
Os02t0638650-01	Rice	nucleus	32.01	27.27
Zm00001d002867_P001	Maize	nucleus	30.52	27.21
VIT_00s0662g00040.t01	Wine grape	nucleus	25.06	27.01
Zm00001d017366_P001	Maize	nucleus	30.02	26.95
TraesCS2A01G373700.1	Wheat	nucleus	30.27	26.87
TraesCS2B01G390800.1	Wheat	nucleus	30.27	26.87
KXG26694	Sorghum	nucleus	30.77	26.84
TraesCS6D01G217800.1	Wheat	nucleus	30.27	26.7
TraesCS6A01G235100.1	Wheat	nucleus	30.52	26.68
TraesCS2D01G369900.1	Wheat	nucleus	30.02	26.59
VIT_07s0031g00420.t01	Wine grape	nucleus	6.2	26.04
VIT_09s0002g06750.t01	Wine grape	mitochondrion	11.91	25.95
OQU85375	Sorghum	nucleus	30.02	25.85
VIT_02s0025g01360.t01	Wine grape	nucleus	16.38	25.0
VIT_09s0002g09120.t01	Wine grape	nucleus	10.67	24.57
VIT_09s0002g09140.t01	Wine grape	nucleus	10.67	24.29
VIT_04s0008g06000.t01	Wine grape	mitochondrion	11.17	24.06
VIT_04s0008g05440.t01	Wine grape	nucleus	10.67	22.16
HORVU6Hr1G060140.1	Barley	nucleus, plastid	30.27	22.06
VIT_11s0016g05340.t01	Wine grape	nucleus	10.67	21.08
VIT_05s0029g00140.t01	Wine grape	nucleus	19.85	19.8

Protein Annotations

EntrezGene:104877562	MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ProteinID:CCB46364
ProteinID:CCB46364.1	InterPro:DNA-bd_dom_sf	UniProt:F6H268	EMBL:FN595229	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31657	PANTHER:PTHR31657:SF19	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0001985711
ArrayExpress:VIT_19s0014g03180	EnsemblPlantsGene:VIT_19s0014g03180	EnsemblPlants:VIT_19s0014g03180.t01	RefSeq:XP_010644377.1	SEG:seg	:

Description

No Description!

Coordinates

chr19:-:3327403..3328786

Molecular Weight (calculated)

45064.2 Da

IEP (calculated)

9.786

GRAVY (calculated)

-0.709

Length

403 amino acids

Sequence
(BLAST)

001: MDDANSSVSN QENEDVGNMA RTVLNRNPGK DKGKRRCIGS EKKLLKPAME ESLMLNRPLK RVRSLEHQIP IQRPSHFIHQ MAPNPISSPA SLRFGLPFSM
101: PTHVEQQMIS FSPNDSELEP YSNHRLLQYW SSVLNLSPRG RTMMPTMLTN GLVQDGGGVF RPSTIGPPNA KLYRGVRQRQ WGKWVAEIRL PRNRRRLWLG
201: TFDTAEEAAL AYDREAFKQR GENARLNFPH LFVHQKSEDM GTLMASNSAS SYFSHITNKN PLPQQNQQHL QQVQGETNSP VWQMGMVPSA LGHSPKKDLA
301: KPSFKGKCPA DLRSSEITVQ AQALTPGSGT GEGISEFSNP VWGDTTETWY NSVSAGMVPV SPLWDYFDAA NHLLPQPRTT FPSSQPQDSS STTVQQPQDN
401: YAA

Best Arabidopsis Sequence Match ( AT4G28140.1 )
(BLAST)

001: MDFDEELNLC ITKGKNVDHS FGGEASSTSP RSMKKMKSPS RPKPYFQSSS SPYSLEAFPF SLDPTLQNQQ QQLGSYVPVL EQRQDPTMQG QKQMISFSPQ
101: QQQQQQQYMA QYWSDTLNLS PRGRMMMMMS QEAVQPYIAT KLYRGVRQRQ WGKWVAEIRK PRSRARLWLG TFDTAEEAAM AYDRQAFKLR GHSATLNFPE
201: HFVNKESELH DSNSSDQKEP ETPQPSEVNL ESKELPVIDV GREEGMAEAW YNAITSGWGP ESPLWDDLDS SHQFSSESSS SSPLSCPMRP FF

Arabidopsis Description

ERF054Ethylene-responsive transcription factor ERF054 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0J3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.