Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29884 | Canola | nucleus | 95.4 | 95.4 |
| CDY14255 | Canola | nucleus | 77.01 | 72.83 |
| CDX97423 | Canola | nucleus | 77.39 | 72.4 |
| CDY19002 | Canola | nucleus | 78.54 | 69.97 |
| CDX89202 | Canola | nucleus | 78.16 | 69.62 |
| AT4G28140.1 | Thale cress | nucleus | 77.39 | 69.18 |
| CDY08817 | Canola | mitochondrion | 19.92 | 42.28 |
| CDX81987 | Canola | nucleus | 50.19 | 41.85 |
| CDY69209 | Canola | nucleus | 49.43 | 41.48 |
| Solyc07g054220.1.1 | Tomato | nucleus | 47.13 | 31.54 |
| PGSC0003DMT400047265 | Potato | nucleus | 46.36 | 31.11 |
| KRH26929 | Soybean | nucleus | 44.06 | 27.25 |
| KRH22409 | Soybean | nucleus | 43.68 | 27.21 |
| VIT_12s0059g00280.t01 | Wine grape | nucleus | 47.89 | 26.88 |
| CDX89442 | Canola | plastid | 23.37 | 26.18 |
| KRH55997 | Soybean | nucleus | 39.46 | 25.56 |
| KRH25541 | Soybean | nucleus | 39.85 | 25.55 |
| CDY25578 | Canola | plastid | 22.99 | 25.42 |
| Zm00001d025910_P001 | Maize | nucleus | 39.08 | 25.25 |
| CDX83982 | Canola | nucleus | 17.24 | 24.86 |
| CDX96845 | Canola | nucleus | 17.24 | 24.86 |
| CDY36551 | Canola | nucleus | 17.24 | 24.46 |
| CDX72672 | Canola | nucleus | 23.75 | 24.12 |
| Os04t0529100-01 | Rice | nucleus | 34.48 | 23.87 |
| CDY31606 | Canola | nucleus | 23.75 | 23.85 |
| CDX90362 | Canola | nucleus | 23.37 | 23.64 |
| Zm00001d017366_P001 | Maize | nucleus | 40.61 | 23.61 |
| CDY39637 | Canola | nucleus | 17.24 | 23.56 |
| Zm00001d002867_P001 | Maize | nucleus | 40.61 | 23.45 |
| Zm00001d051239_P001 | Maize | nucleus | 39.85 | 23.37 |
| CDY67940 | Canola | nucleus | 16.86 | 23.16 |
| CDY21346 | Canola | nucleus | 22.99 | 23.08 |
| CDY38238 | Canola | nucleus | 22.99 | 23.08 |
| GSMUA_Achr4P26080_001 | Banana | nucleus | 35.63 | 22.91 |
| CDY14636 | Canola | nucleus, plastid | 21.84 | 22.8 |
| TraesCS6D01G217800.1 | Wheat | nucleus | 39.85 | 22.76 |
| CDX88176 | Canola | nucleus | 16.48 | 22.75 |
| CDX80507 | Canola | nucleus | 16.48 | 22.75 |
| CDX69387 | Canola | nucleus | 22.99 | 22.73 |
| CDY39455 | Canola | nucleus | 23.37 | 22.68 |
| VIT_19s0014g03180.t01 | Wine grape | nucleus | 34.87 | 22.58 |
| CDY68539 | Canola | mitochondrion, nucleus | 16.09 | 22.58 |
| TraesCS6B01G263800.1 | Wheat | nucleus | 39.08 | 22.47 |
| CDY42004 | Canola | nucleus | 22.61 | 22.35 |
| CDY19812 | Canola | mitochondrion | 15.33 | 22.35 |
| KXG26694 | Sorghum | nucleus | 39.46 | 22.29 |
| CDX88163 | Canola | mitochondrion | 14.94 | 22.29 |
| CDY19805 | Canola | nucleus | 15.71 | 22.28 |
| TraesCS2A01G373700.1 | Wheat | nucleus | 38.7 | 22.25 |
| Os02t0638650-01 | Rice | nucleus | 40.23 | 22.2 |
| CDX87096 | Canola | mitochondrion | 15.33 | 22.1 |
| CDY65537 | Canola | mitochondrion | 14.56 | 22.09 |
| TraesCS2B01G390800.1 | Wheat | nucleus | 38.31 | 22.03 |
| CDX69779 | Canola | nucleus | 15.71 | 21.93 |
| TraesCS6A01G235100.1 | Wheat | nucleus | 38.7 | 21.91 |
| OQU85375 | Sorghum | nucleus | 39.08 | 21.79 |
| CDY05373 | Canola | mitochondrion | 15.33 | 21.74 |
| TraesCS2D01G369900.1 | Wheat | nucleus | 37.55 | 21.54 |
| CDX87089 | Canola | nucleus | 16.09 | 21.32 |
| CDX87480 | Canola | nucleus | 22.22 | 21.25 |
| CDY05479 | Canola | mitochondrion | 14.94 | 21.08 |
| CDX73367 | Canola | nucleus | 25.29 | 20.56 |
| CDY33983 | Canola | nucleus | 21.46 | 20.36 |
| CDX68032 | Canola | nucleus | 24.52 | 19.94 |
| CDY14542 | Canola | nucleus | 21.46 | 19.86 |
| CDY08816 | Canola | nucleus | 21.46 | 19.86 |
| CDY31284 | Canola | nucleus | 21.07 | 19.78 |
| CDY48227 | Canola | nucleus | 24.14 | 19.63 |
| CDY26847 | Canola | nucleus | 22.99 | 19.29 |
| CDX79244 | Canola | nucleus | 24.14 | 18.86 |
| HORVU6Hr1G060140.1 | Barley | nucleus, plastid | 39.46 | 18.63 |
| CDY47850 | Canola | nucleus | 21.46 | 18.36 |
| CDX88414 | Canola | nucleus | 22.22 | 18.07 |
| CDY71425 | Canola | nucleus | 19.92 | 17.75 |
| CDY46525 | Canola | nucleus | 19.16 | 17.48 |
| CDY53558 | Canola | nucleus | 23.37 | 17.48 |
| CDY08372 | Canola | nucleus | 6.13 | 6.81 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | GO:A0A078J0L8 | UniProt:A0A078J0L8 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY58717 | ProteinID:CDY58717 | ProteinID:CDY58717.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00025036001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31657 | PANTHER:PTHR31657:SF19 | SMART:SM00380 | SUPFAM:SSF54171 |
| SUPFAM:SSF81995 | UniParc:UPI0004EE23EE | SEG:seg | : | : | : |
Description
BnaC07g50590DBnaC07g50590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0L8]
Coordinates
chrLK033693:-:6865..7650
Molecular Weight (calculated)
29807.2 Da
IEP (calculated)
4.646
GRAVY (calculated)
-0.911
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFDEELNLC ITKGKNTDPY FGEASSSPRS IKKMRDTDHR PKPYFPFTLD PTIQNQQQQH FGYVQQHDQT MQGQNQMISF SPQQPQQQYW SGTLNLSQES
101: VQPYSATKLY RGVRQRQWGK WVAEIRKPRS RARLWLGTFD TAEEAAMAYD RQAFILRGHN ATLNFPEHYV NKEVELHDET DASSSLDQKQ SEAPQLDEVN
201: LEGEEEAVTN GGVEDGMAEA WLNAVTAGWG PESPLWDDLD SSHFPQCSST SSASCPMRPY F
101: VQPYSATKLY RGVRQRQWGK WVAEIRKPRS RARLWLGTFD TAEEAAMAYD RQAFILRGHN ATLNFPEHYV NKEVELHDET DASSSLDQKQ SEAPQLDEVN
201: LEGEEEAVTN GGVEDGMAEA WLNAVTAGWG PESPLWDDLD SSHFPQCSST SSASCPMRPY F
001: MDFDEELNLC ITKGKNVDHS FGGEASSTSP RSMKKMKSPS RPKPYFQSSS SPYSLEAFPF SLDPTLQNQQ QQLGSYVPVL EQRQDPTMQG QKQMISFSPQ
101: QQQQQQQYMA QYWSDTLNLS PRGRMMMMMS QEAVQPYIAT KLYRGVRQRQ WGKWVAEIRK PRSRARLWLG TFDTAEEAAM AYDRQAFKLR GHSATLNFPE
201: HFVNKESELH DSNSSDQKEP ETPQPSEVNL ESKELPVIDV GREEGMAEAW YNAITSGWGP ESPLWDDLDS SHQFSSESSS SSPLSCPMRP FF
101: QQQQQQQYMA QYWSDTLNLS PRGRMMMMMS QEAVQPYIAT KLYRGVRQRQ WGKWVAEIRK PRSRARLWLG TFDTAEEAAM AYDRQAFKLR GHSATLNFPE
201: HFVNKESELH DSNSSDQKEP ETPQPSEVNL ESKELPVIDV GREEGMAEAW YNAITSGWGP ESPLWDDLDS SHQFSSESSS SSPLSCPMRP FF
Arabidopsis Description
ERF054Ethylene-responsive transcription factor ERF054 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0J3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.