Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017879.1-P | Field mustard | nucleus | 99.23 | 99.23 |
| CDX72672 | Canola | nucleus | 89.62 | 90.66 |
| CDY42004 | Canola | nucleus | 86.54 | 85.23 |
| CDX69387 | Canola | nucleus | 85.38 | 84.09 |
| CDY39455 | Canola | nucleus | 83.85 | 81.04 |
| CDX90362 | Canola | nucleus | 78.08 | 78.68 |
| AT4G39780.1 | Thale cress | nucleus | 80.77 | 77.21 |
| CDX89442 | Canola | plastid | 52.31 | 58.37 |
| CDY25578 | Canola | plastid | 52.31 | 57.63 |
| CDY08817 | Canola | mitochondrion | 24.62 | 52.03 |
| CDY14636 | Canola | nucleus, plastid | 45.38 | 47.2 |
| CDY14542 | Canola | nucleus | 50.77 | 46.81 |
| CDY21346 | Canola | nucleus | 46.54 | 46.54 |
| CDY38238 | Canola | nucleus | 46.15 | 46.15 |
| Solyc04g054910.2.1 | Tomato | nucleus | 48.85 | 45.68 |
| CDY33983 | Canola | nucleus | 48.08 | 45.45 |
| CDY08816 | Canola | nucleus | 49.23 | 45.39 |
| CDX87480 | Canola | nucleus | 46.92 | 44.69 |
| CDY31284 | Canola | nucleus | 46.92 | 43.88 |
| KRG97594 | Soybean | nucleus | 51.92 | 43.69 |
| CDY26847 | Canola | nucleus | 51.54 | 43.09 |
| KRH31278 | Soybean | nucleus | 51.54 | 42.14 |
| CDX68032 | Canola | nucleus | 50.0 | 40.5 |
| CDX88414 | Canola | nucleus | 49.23 | 39.88 |
| CDX79244 | Canola | nucleus | 50.77 | 39.52 |
| PGSC0003DMT400053152 | Potato | nucleus | 53.46 | 37.57 |
| VIT_00s0662g00040.t01 | Wine grape | nucleus | 51.54 | 35.83 |
| CDX73367 | Canola | nucleus | 40.38 | 32.71 |
| CDY48227 | Canola | nucleus | 40.38 | 32.71 |
| CDY65537 | Canola | mitochondrion | 20.0 | 30.23 |
| CDX88163 | Canola | mitochondrion | 20.0 | 29.71 |
| CDY19812 | Canola | mitochondrion | 20.38 | 29.61 |
| CDX87096 | Canola | mitochondrion | 20.38 | 29.28 |
| CDX96845 | Canola | nucleus | 20.38 | 29.28 |
| CDX83982 | Canola | nucleus | 20.38 | 29.28 |
| CDY36551 | Canola | nucleus | 20.38 | 28.8 |
| CDY05373 | Canola | mitochondrion | 20.0 | 28.26 |
| CDY05479 | Canola | mitochondrion | 20.0 | 28.11 |
| CDY39637 | Canola | nucleus | 20.38 | 27.75 |
| CDY67940 | Canola | nucleus | 19.62 | 26.84 |
| CDX80507 | Canola | nucleus | 19.23 | 26.45 |
| CDX88176 | Canola | nucleus | 19.23 | 26.45 |
| CDY68539 | Canola | mitochondrion, nucleus | 18.85 | 26.34 |
| CDX69779 | Canola | nucleus | 18.85 | 26.2 |
| CDY19805 | Canola | nucleus | 18.46 | 26.09 |
| CDY46525 | Canola | nucleus | 28.46 | 25.87 |
| CDY71425 | Canola | nucleus | 28.85 | 25.6 |
| CDY14255 | Canola | nucleus | 26.54 | 25.0 |
| CDX97423 | Canola | nucleus | 26.54 | 24.73 |
| CDY47850 | Canola | nucleus | 28.85 | 24.59 |
| CDX87089 | Canola | nucleus | 18.46 | 24.37 |
| CDY29884 | Canola | nucleus | 24.23 | 24.14 |
| CDY53558 | Canola | nucleus | 32.31 | 24.07 |
| CDX89202 | Canola | nucleus | 26.92 | 23.89 |
| CDY19002 | Canola | nucleus | 26.92 | 23.89 |
| CDY58717 | Canola | nucleus | 23.85 | 23.75 |
| CDX81987 | Canola | nucleus | 27.69 | 23.0 |
| CDY69209 | Canola | nucleus | 26.15 | 21.86 |
| CDY08372 | Canola | nucleus | 11.15 | 12.34 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | GO:A0A078H1F5 | UniProt:A0A078H1F5 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY31606 | ProteinID:CDY31606 | ProteinID:CDY31606.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00050125001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31657 | PANTHER:PTHR31657:SF9 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EF1734 | SEG:seg | : | : | : | : |
Description
BnaA03g54460DBnaA03g54460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1F5]
Coordinates
chrLK032275:+:220211..221406
Molecular Weight (calculated)
29115.5 Da
IEP (calculated)
5.190
GRAVY (calculated)
-0.467
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAIDMFNSS TDLSDPLKEE LMKALKPSLP PVPNTIFGFN QTAPLGLNQL TPYQIHQIQN QLNQRRSTTI SNLSPKPVPM KNMTVHKLYR GVRQRHWGKW
101: VAEIRLPKNR TRLWLGTFDT AEEAAMAYDQ AAYKLRGELA RLNFPHTRRE CGYGGGDGSF KPLHPSVEAK LEAICQSLVK TEDLDLPCSE TELFLPPKTE
201: YEENTFSDES QVGSSSPESG VTTAFLGFLD SGFDEIGSFV LEKFPSVEID WDAISKLSES
101: VAEIRLPKNR TRLWLGTFDT AEEAAMAYDQ AAYKLRGELA RLNFPHTRRE CGYGGGDGSF KPLHPSVEAK LEAICQSLVK TEDLDLPCSE TELFLPPKTE
201: YEENTFSDES QVGSSSPESG VTTAFLGFLD SGFDEIGSFV LEKFPSVEID WDAISKLSES
001: MAAIDMFNSN TDPFQEELMK ALQPYTTNTD SSSPTYSNTV FGFNQTTSLG LNQLTPYQIH QIQNQLNQRR NIISPNLAPK PVPMKNMTAQ KLYRGVRQRH
101: WGKWVAEIRL PKNRTRLWLG TFDTAEEAAM AYDLAAYKLR GEFARLNFPQ FRHEDGYYGG GSCFNPLHSS VDAKLQEICQ SLRKTEDIDL PCSETELFPP
201: KTEYQESEYG FLRSDENSFS DESHVESSSP ESGITTFLDF SDSGFDEIGS FGLEKFPSVE IDWDAISKLS ES
101: WGKWVAEIRL PKNRTRLWLG TFDTAEEAAM AYDLAAYKLR GEFARLNFPQ FRHEDGYYGG GSCFNPLHSS VDAKLQEICQ SLRKTEDIDL PCSETELFPP
201: KTEYQESEYG FLRSDENSFS DESHVESSSP ESGITTFLDF SDSGFDEIGS FGLEKFPSVE IDWDAISKLS ES
Arabidopsis Description
ERF060Ethylene-responsive transcription factor ERF060 [Source:UniProtKB/Swiss-Prot;Acc:O65665]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.