Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31278 | Soybean | nucleus | 86.41 | 83.96 |
| KRH43213 | Soybean | nucleus | 55.34 | 54.81 |
| KRH59367 | Soybean | nucleus | 53.4 | 52.88 |
| CDY31606 | Canola | nucleus | 43.69 | 51.92 |
| AT4G39780.1 | Thale cress | nucleus | 45.31 | 51.47 |
| Solyc04g054910.2.1 | Tomato | nucleus | 46.28 | 51.44 |
| CDX90362 | Canola | nucleus | 42.72 | 51.16 |
| Bra017879.1-P | Field mustard | nucleus | 43.04 | 51.15 |
| KRH53092 | Soybean | nucleus | 49.84 | 50.99 |
| KRH62373 | Soybean | nucleus | 51.13 | 50.32 |
| Bra010657.1-P | Field mustard | nucleus | 41.75 | 50.0 |
| Bra011833.1-P | Field mustard | nucleus | 44.66 | 50.0 |
| CDY39455 | Canola | nucleus | 43.37 | 49.81 |
| CDX72672 | Canola | nucleus | 41.42 | 49.81 |
| CDY42004 | Canola | nucleus | 42.39 | 49.62 |
| CDX69387 | Canola | nucleus | 42.39 | 49.62 |
| CDX89442 | Canola | plastid | 36.25 | 48.07 |
| KRH16699 | Soybean | nucleus | 47.9 | 47.44 |
| CDY25578 | Canola | plastid | 35.6 | 46.61 |
| Bra030255.1-P | Field mustard | plastid | 35.6 | 46.61 |
| AT2G22200.1 | Thale cress | plastid | 37.86 | 44.83 |
| KRH18890 | Soybean | nucleus | 44.66 | 44.37 |
| PGSC0003DMT400053152 | Potato | nucleus | 52.1 | 43.51 |
| KRH09667 | Soybean | mitochondrion, nucleus | 18.45 | 32.02 |
| KRH09737 | Soybean | nucleus | 17.15 | 30.11 |
| KRH61698 | Soybean | mitochondrion, nucleus | 17.8 | 28.5 |
| KRH52366 | Soybean | mitochondrion, nucleus | 17.8 | 28.35 |
| KRH05258 | Soybean | nucleus | 18.45 | 28.22 |
| KRH44522 | Soybean | mitochondrion | 17.8 | 28.21 |
| KRH15790 | Soybean | nucleus | 18.12 | 28.14 |
| KRH47384 | Soybean | mitochondrion, nucleus | 17.48 | 27.84 |
| KRH27850 | Soybean | nucleus | 28.48 | 27.08 |
| KRH52445 | Soybean | nucleus | 16.18 | 27.03 |
| KRH44444 | Soybean | nucleus | 17.15 | 26.5 |
| KRH47461 | Soybean | nucleus | 16.18 | 26.45 |
| KRH77640 | Soybean | nucleus | 26.86 | 26.43 |
| KRH05157 | Soybean | nucleus | 16.83 | 26.13 |
| KRH61776 | Soybean | nucleus | 16.18 | 26.04 |
| KRH12836 | Soybean | nucleus | 10.36 | 25.2 |
| KRH23632 | Soybean | nucleus | 18.12 | 24.78 |
| KRH62994 | Soybean | nucleus | 16.5 | 23.39 |
| KRH54960 | Soybean | nucleus | 16.5 | 23.29 |
| KRH34596 | Soybean | nucleus | 28.16 | 22.48 |
| KRH20262 | Soybean | nucleus | 16.83 | 21.85 |
| KRH03696 | Soybean | nucleus | 16.83 | 21.76 |
| KRG92191 | Soybean | nucleus | 28.48 | 21.57 |
| KRH26929 | Soybean | nucleus | 29.45 | 21.56 |
| KRH22409 | Soybean | nucleus | 28.48 | 21.0 |
| KRH55997 | Soybean | nucleus | 25.57 | 19.6 |
| KRH25541 | Soybean | nucleus | 25.24 | 19.16 |
Protein Annotations
| EntrezGene:106796800 | MapMan:15.5.7.2 | Gene3D:3.30.730.10 | EMBL:ACUP02010801 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| InterPro:DNA-bd_dom_sf | EnsemblPlantsGene:GLYMA_18G018200 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| UniProt:I1MYT3 | InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlants:KRG97594 | ProteinID:KRG97594 | ProteinID:KRG97594.1 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31657 | PANTHER:PTHR31657:SF9 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI000233EB3B | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:1329855..1331629
Molecular Weight (calculated)
34590.3 Da
IEP (calculated)
6.403
GRAVY (calculated)
-0.579
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVMDMYNT SSIMIPDFLD QCSDQELMKA LEPFMKSDSS SITYPSFSSF SSSPNFSSTT SYEQKVSITP NHASSIKLNQ LTPSQMFQIQ ARIQVPRGQF
101: LSPKPIPMKH VRASPSSKPT KLYRGVRQRH WGKWVAEIRL PKNRTRLWLG TFDTAEEAAL AYDNAAFKLR GENARLNFPH LRHHGARAYG EFGNYKPLPS
201: AVDAKLQAIC QSLGTNSQKL KTQNPIVLDT HKAETETSEF QDFNKVENYQ TSSSSAFSDE YSSSSSSSSP ESDITLLDFS DSCETMDNLG LDLEKYPSVE
301: IDWAALSDS
101: LSPKPIPMKH VRASPSSKPT KLYRGVRQRH WGKWVAEIRL PKNRTRLWLG TFDTAEEAAL AYDNAAFKLR GENARLNFPH LRHHGARAYG EFGNYKPLPS
201: AVDAKLQAIC QSLGTNSQKL KTQNPIVLDT HKAETETSEF QDFNKVENYQ TSSSSAFSDE YSSSSSSSSP ESDITLLDFS DSCETMDNLG LDLEKYPSVE
301: IDWAALSDS
001: MAAIDMFNSN TDPFQEELMK ALQPYTTNTD SSSPTYSNTV FGFNQTTSLG LNQLTPYQIH QIQNQLNQRR NIISPNLAPK PVPMKNMTAQ KLYRGVRQRH
101: WGKWVAEIRL PKNRTRLWLG TFDTAEEAAM AYDLAAYKLR GEFARLNFPQ FRHEDGYYGG GSCFNPLHSS VDAKLQEICQ SLRKTEDIDL PCSETELFPP
201: KTEYQESEYG FLRSDENSFS DESHVESSSP ESGITTFLDF SDSGFDEIGS FGLEKFPSVE IDWDAISKLS ES
101: WGKWVAEIRL PKNRTRLWLG TFDTAEEAAM AYDLAAYKLR GEFARLNFPQ FRHEDGYYGG GSCFNPLHSS VDAKLQEICQ SLRKTEDIDL PCSETELFPP
201: KTEYQESEYG FLRSDENSFS DESHVESSSP ESGITTFLDF SDSGFDEIGS FGLEKFPSVE IDWDAISKLS ES
Arabidopsis Description
ERF060Ethylene-responsive transcription factor ERF060 [Source:UniProtKB/Swiss-Prot;Acc:O65665]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.