Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 3
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc06g053240.2.1 | Tomato | nucleus | 13.57 | 87.1 |
KRH52445 | Soybean | nucleus | 66.83 | 71.89 |
KRH61776 | Soybean | nucleus | 66.83 | 69.27 |
KRH09737 | Soybean | nucleus | 55.78 | 63.07 |
KRH47461 | Soybean | nucleus | 58.79 | 61.9 |
KRH44444 | Soybean | nucleus | 59.3 | 59.0 |
Bra036543.1-P | Field mustard | nucleus | 53.77 | 58.47 |
CDY19805 | Canola | nucleus | 53.77 | 58.15 |
AT5G25390.2 | Thale cress | nucleus | 54.27 | 57.14 |
CDY68539 | Canola | mitochondrion, nucleus | 53.27 | 56.99 |
Bra008985.1-P | Field mustard | nucleus | 53.27 | 56.68 |
CDX69779 | Canola | nucleus | 53.27 | 56.68 |
AT5G11190.1 | Thale cress | mitochondrion, nucleus | 52.76 | 55.56 |
CDX88176 | Canola | nucleus | 52.76 | 55.56 |
CDX80507 | Canola | nucleus | 52.76 | 55.56 |
PGSC0003DMT400077702 | Potato | nucleus | 56.28 | 55.45 |
CDX87089 | Canola | nucleus | 54.27 | 54.82 |
KRH54960 | Soybean | nucleus | 57.79 | 52.51 |
KRH62994 | Soybean | nucleus | 56.28 | 51.38 |
KRH20262 | Soybean | nucleus | 58.79 | 49.16 |
KRH03696 | Soybean | nucleus | 58.79 | 48.95 |
Bra009837.1-P | Field mustard | mitochondrion, nucleus | 41.21 | 48.24 |
KRH09667 | Soybean | mitochondrion, nucleus | 35.18 | 39.33 |
KRH47384 | Soybean | mitochondrion, nucleus | 36.68 | 37.63 |
KRH05258 | Soybean | nucleus | 37.69 | 37.13 |
KRH12836 | Soybean | nucleus | 23.62 | 37.01 |
KRH44522 | Soybean | mitochondrion | 36.18 | 36.92 |
KRH61698 | Soybean | mitochondrion, nucleus | 35.68 | 36.79 |
KRH52366 | Soybean | mitochondrion, nucleus | 35.68 | 36.6 |
KRH15790 | Soybean | nucleus | 36.18 | 36.18 |
KRH23632 | Soybean | nucleus | 35.18 | 30.97 |
KRH53092 | Soybean | nucleus | 28.14 | 18.54 |
KRH77640 | Soybean | nucleus | 28.64 | 18.15 |
KRH27850 | Soybean | nucleus | 28.64 | 17.54 |
KRH16699 | Soybean | nucleus | 27.14 | 17.31 |
KRH31278 | Soybean | nucleus | 27.14 | 16.98 |
KRH62373 | Soybean | nucleus | 26.63 | 16.88 |
KRG97594 | Soybean | nucleus | 26.13 | 16.83 |
KRH18890 | Soybean | nucleus | 26.13 | 16.72 |
KRH43213 | Soybean | nucleus | 26.13 | 16.67 |
KRH59367 | Soybean | nucleus | 26.13 | 16.67 |
KRH34596 | Soybean | nucleus | 25.13 | 12.92 |
KRG92191 | Soybean | nucleus | 24.12 | 11.76 |
KRH55997 | Soybean | nucleus | 22.61 | 11.17 |
KRH25541 | Soybean | nucleus | 22.61 | 11.06 |
KRH22409 | Soybean | nucleus | 22.11 | 10.5 |
KRH26929 | Soybean | nucleus | 22.11 | 10.43 |
Protein Annotations
EntrezGene:100784305 | MapMan:15.5.7.1 | MapMan:21.9.3.1 | Gene3D:3.30.730.10 | EMBL:ACUP02010681 | InterPro:AP2/ERF-transcript_factor |
InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | EnsemblPlantsGene:GLYMA_17G210500 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009987 | UniProt:I1MWS0 | InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlants:KRH05157 |
ProteinID:KRH05157 | ProteinID:KRH05157.1 | PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 |
PANTHER:PTHR31194 | PANTHER:PTHR31194:SF13 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000233DF29 | SEG:seg |
Description
hypothetical protein
Coordinates
chr17:-:34746204..34747920
Molecular Weight (calculated)
21766.6 Da
IEP (calculated)
8.506
GRAVY (calculated)
-0.634
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQAKKFRGV RQRQWGSWVS EIRHPLLKRR VWLGTFETAE AAARAYDQAA ILMSGQNAKT NFPTQMNQPQ GATTTTPCVD PFSSPNVLSE HLSRKLKRCC
101: KDPSPSLTCL RLDADNSHIG VWQKGAGPHS DSNWIVRVEI GKKLHAEGES SSVSSSAAGG SPPKPSVGHG DGYGDEEDRI AMQMIDELLN WNHPCGSSN
101: KDPSPSLTCL RLDADNSHIG VWQKGAGPHS DSNWIVRVEI GKKLHAEGES SSVSSSAAGG SPPKPSVGHG DGYGDEEDRI AMQMIDELLN WNHPCGSSN
001: MVQTKKFRGV RQRHWGSWVA EIRHPLLKRR IWLGTFETAE EAARAYDEAA VLMSGRNAKT NFPLNNNNTG ETSEGKTDIS ASSTMSSSTS SSSLSSILSA
101: KLRKCCKSPS PSLTCLRLDT ASSHIGVWQK RAGSKSDSSW VMTVELGPAS SSQETTSKAS QDAILAPTTE VEIGGSREEV LDEEEKVALQ MIEELLNTN
101: KLRKCCKSPS PSLTCLRLDT ASSHIGVWQK RAGSKSDSSW VMTVELGPAS SSQETTSKAS QDAILAPTTE VEIGGSREEV LDEEEKVALQ MIEELLNTN
Arabidopsis Description
WIN1Ethylene-responsive transcription factor WIN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI33]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.