CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47461	Soybean	nucleus	89.5	94.71
KRH09737	Soybean	nucleus	71.0	80.68
KRH52445	Soybean	nucleus	57.0	61.62
KRH61776	Soybean	nucleus	57.0	59.38
KRH05157	Soybean	nucleus	59.0	59.3
KRH62994	Soybean	nucleus	62.0	56.88
KRH54960	Soybean	nucleus	61.0	55.71
KRH20262	Soybean	nucleus	62.5	52.52
KRH03696	Soybean	nucleus	62.5	52.3
KRH09667	Soybean	mitochondrion, nucleus	38.5	43.26
KRH61698	Soybean	mitochondrion, nucleus	40.0	41.45
KRH52366	Soybean	mitochondrion, nucleus	40.0	41.24
KRH12836	Soybean	nucleus	26.0	40.94
KRH47384	Soybean	mitochondrion, nucleus	39.0	40.21
KRH44522	Soybean	mitochondrion	39.0	40.0
HORVU7Hr1G089930.7	Barley	nucleus, plastid	54.5	39.93
KRH15790	Soybean	nucleus	39.5	39.7
KRH05258	Soybean	nucleus	40.0	39.6
KRH23632	Soybean	nucleus	38.0	33.63
KRH53092	Soybean	nucleus	28.0	18.54
KRH18890	Soybean	nucleus	27.0	17.36
KRH16699	Soybean	nucleus	27.0	17.31
KRH31278	Soybean	nucleus	27.5	17.3
KRH62373	Soybean	nucleus	27.0	17.2
KRG97594	Soybean	nucleus	26.5	17.15
KRH59367	Soybean	nucleus	26.0	16.67
KRH43213	Soybean	nucleus	26.0	16.67
KRH77640	Soybean	nucleus	26.0	16.56
KRH27850	Soybean	nucleus	26.0	16.0
KRH34596	Soybean	nucleus	24.5	12.66
KRG92191	Soybean	nucleus	23.5	11.52
KRH55997	Soybean	nucleus	23.0	11.41
KRH25541	Soybean	nucleus	23.0	11.3
KRH26929	Soybean	nucleus	21.0	9.95
KRH22409	Soybean	nucleus	20.5	9.79

Protein Annotations

EntrezGene:100785898	MapMan:15.5.7.1	MapMan:21.9.3.1	Gene3D:3.30.730.10	EMBL:ACUP02004928	InterPro:AP2/ERF-transcript_factor
InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_08G211600	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	UniProt:I1KVD7	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KRH44444
ProteinID:KRH44444	ProteinID:KRH44444.1	PFAM:PF00847	PIRSF:PIRSF038123	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31194	PANTHER:PTHR31194:SF24	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0000E6483E	SEG:seg

Description

hypothetical protein

Coordinates

chr8:-:17085484..17087015

Molecular Weight (calculated)

22465.2 Da

IEP (calculated)

6.250

GRAVY (calculated)

-0.749

Length

200 amino acids

Sequence
(BLAST)

001: MVQSRKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAARAYDEAA ILMSGRNAKT NFPVGENQIV GNHSSNTSSS STTTLSAVLS AKLRKCCKSP
101: SPSLTCLRLD TENSHIGVWQ KRAGPRSDSN WIMMVELENK NNDNEGDHHQ GPSSSDDSEF PVVVVDVDAQ EKVKPEEEST GLDEEQKMAL QMIEELLNRN

Best Arabidopsis Sequence Match ( AT1G15360.2 )
(BLAST)

001: MVQTKKFRGV RQRHWGSWVA EIRHPLLKRR IWLGTFETAE EAARAYDEAA VLMSGRNAKT NFPLNNNNTG ETSEGKTDIS ASSTMSSSTS SSSLSSILSA
101: KLRKCCKSPS PSLTCLRLDT ASSHIGVWQK RAGSKSDSSW VMTVELGPAS SSQETTSKAS QDAILAPTTE VEIGGSREEV LDEEEKVALQ MIEELLNTN

Arabidopsis Description

WIN1Ethylene-responsive transcription factor WIN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI33]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.