Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G22190.1 | KRG97837 | AT2G39760.1 | 19843165 |
| AT1G22190.1 | KRH31032 | AT2G39760.1 | 19843165 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH53092 | Soybean | nucleus | 86.31 | 89.74 |
| KRH16699 | Soybean | nucleus | 64.01 | 64.42 |
| KRH18890 | Soybean | nucleus | 62.42 | 63.02 |
| Bra031371.1-P | Field mustard | nucleus | 48.09 | 58.08 |
| CDY21346 | Canola | nucleus | 48.09 | 58.08 |
| CDY38238 | Canola | nucleus | 47.77 | 57.69 |
| AT1G22190.1 | Thale cress | nucleus | 46.82 | 56.32 |
| Solyc04g072900.1.1 | Tomato | nucleus | 46.18 | 54.92 |
| VIT_18s0001g05250.t01 | Wine grape | nucleus | 60.51 | 51.77 |
| KRG97594 | Soybean | nucleus | 50.32 | 51.13 |
| KRH31278 | Soybean | nucleus | 51.59 | 50.94 |
| KRH43213 | Soybean | nucleus | 49.04 | 49.36 |
| Solyc12g056980.1.1 | Tomato | nucleus | 48.09 | 49.19 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.36 | 48.36 |
| PGSC0003DMT400024508 | Potato | nucleus | 55.1 | 47.14 |
| KRH59367 | Soybean | nucleus | 46.82 | 47.12 |
| GSMUA_Achr10P... | Banana | nucleus | 43.63 | 46.6 |
| PGSC0003DMT400022023 | Potato | nucleus | 48.09 | 44.54 |
| KRH09667 | Soybean | mitochondrion, nucleus | 18.47 | 32.58 |
| KRH09737 | Soybean | nucleus | 17.52 | 31.25 |
| KRH44522 | Soybean | mitochondrion | 18.79 | 30.26 |
| KRH47384 | Soybean | mitochondrion, nucleus | 18.47 | 29.9 |
| KRH61698 | Soybean | mitochondrion, nucleus | 18.15 | 29.53 |
| KRH52366 | Soybean | mitochondrion, nucleus | 18.15 | 29.38 |
| KRH77640 | Soybean | nucleus | 28.66 | 28.66 |
| KRH52445 | Soybean | nucleus | 16.56 | 28.11 |
| KRH47461 | Soybean | nucleus | 16.56 | 27.51 |
| KRH05258 | Soybean | nucleus | 17.52 | 27.23 |
| KRH15790 | Soybean | nucleus | 17.2 | 27.14 |
| KRH61776 | Soybean | nucleus | 16.56 | 27.08 |
| KRH27850 | Soybean | nucleus | 28.03 | 27.08 |
| KRH44444 | Soybean | nucleus | 17.2 | 27.0 |
| KRH05157 | Soybean | nucleus | 16.88 | 26.63 |
| KRH12836 | Soybean | nucleus | 10.51 | 25.98 |
| KRH23632 | Soybean | nucleus | 18.15 | 25.22 |
| KRH34596 | Soybean | nucleus | 30.57 | 24.81 |
| KRH62994 | Soybean | nucleus | 16.88 | 24.31 |
| KRH54960 | Soybean | nucleus | 16.56 | 23.74 |
| KRG92191 | Soybean | nucleus | 29.94 | 23.04 |
| KRH03696 | Soybean | nucleus | 16.56 | 21.76 |
| KRH20262 | Soybean | nucleus | 16.24 | 21.43 |
| KRH55997 | Soybean | nucleus | 26.75 | 20.84 |
| KRH26929 | Soybean | nucleus | 27.71 | 20.62 |
| KRH22409 | Soybean | nucleus | 27.39 | 20.53 |
| KRH25541 | Soybean | nucleus | 26.43 | 20.39 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | EntrezGene:732559 | UniProt:A0A0K2CTG7 | EMBL:ACUP02002237 | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | EnsemblPlantsGene:GLYMA_04G103900 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlants:KRH62373 | ProteinID:KRH62373 | ProteinID:KRH62373.1 |
| EMBL:KT031076 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31657 | PANTHER:PTHR31657:SF9 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00017E12BD | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr4:-:9725664..9727603
Molecular Weight (calculated)
34796.7 Da
IEP (calculated)
7.195
GRAVY (calculated)
-0.651
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAMMDFYSS STEFQLHSDP FRGELMEVLE PFMKSPFSTP SPSNSCFLST SYSPSPNNYS PSLYSNGLSS IPNTTQNLIG FGQGQPTSLV GLNHLTPSQI
101: SQIQAQIQIQ NHSNTLSFLG PKPIPMKHVG MPPKPTKLYR GVRQRHWGKW VAEIRLPKNR TRLWLGTFDT AEEAALAYDK AAYKLRGDFA RLNFPNLRHQ
201: GSSVGGDFGE YKPLHSAVDA KLQAICEGLA ELQKQGKTEK PPRKTRSKLA SPPENDNNND NNSCKVEAAS SSSEGSSPLS VLTFADVSEP QWEGDSDNFN
301: LQKYPSYEID WDSL
101: SQIQAQIQIQ NHSNTLSFLG PKPIPMKHVG MPPKPTKLYR GVRQRHWGKW VAEIRLPKNR TRLWLGTFDT AEEAALAYDK AAYKLRGDFA RLNFPNLRHQ
201: GSSVGGDFGE YKPLHSAVDA KLQAICEGLA ELQKQGKTEK PPRKTRSKLA SPPENDNNND NNSCKVEAAS SSSEGSSPLS VLTFADVSEP QWEGDSDNFN
301: LQKYPSYEID WDSL
001: MAAAMNLYTC SRSFQDSGGE LMDALVPFIK SVSDSPSSSS AASASAFLHP SAFSLPPLPG YYPDSTFLTQ PFSYGSDLQQ TGSLIGLNNL SSSQIHQIQS
101: QIHHPLPPTH HNNNNSFSNL LSPKPLLMKQ SGVAGSCFAY GSGVPSKPTK LYRGVRQRHW GKWVAEIRLP RNRTRLWLGT FDTAEEAALA YDKAAYKLRG
201: DFARLNFPNL RHNGSHIGGD FGEYKPLHSS VDAKLEAICK SMAETQKQDK STKSSKKREK KVSSPDLSEK VKAEENSVSI GGSPPVTEFE ESTAGSSPLS
301: DLTFADPEEP PQWNETFSLE KYPSYEIDWD SILA
101: QIHHPLPPTH HNNNNSFSNL LSPKPLLMKQ SGVAGSCFAY GSGVPSKPTK LYRGVRQRHW GKWVAEIRLP RNRTRLWLGT FDTAEEAALA YDKAAYKLRG
201: DFARLNFPNL RHNGSHIGGD FGEYKPLHSS VDAKLEAICK SMAETQKQDK STKSSKKREK KVSSPDLSEK VKAEENSVSI GGSPPVTEFE ESTAGSSPLS
301: DLTFADPEEP PQWNETFSLE KYPSYEIDWD SILA
Arabidopsis Description
RAP2-4Ethylene-responsive transcription factor RAP2-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.