CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47384	Soybean	mitochondrion, nucleus	83.71	76.8
KRH44522	Soybean	mitochondrion	82.58	75.38
KRH23632	Soybean	nucleus	94.38	74.34
VIT_04s0008g06000.t01	Wine grape	mitochondrion	67.42	64.17
CDY65537	Canola	mitochondrion	61.8	63.95
Bra020490.1-P	Field mustard	mitochondrion	62.36	63.43
CDX88163	Canola	mitochondrion	62.36	63.43
AT5G25190.1	Thale cress	mitochondrion	62.92	61.88
CDX87096	Canola	mitochondrion	62.36	61.33
Bra036536.1-P	Field mustard	mitochondrion	61.24	60.89
CDY19812	Canola	mitochondrion	61.24	60.89
GSMUA_Achr7P19320_001	Banana	nucleus	52.25	60.78
CDY05479	Canola	mitochondrion	62.92	60.54
CDY05373	Canola	mitochondrion	62.36	60.33
KRH12836	Soybean	nucleus	42.13	59.06
Bra009824.1-P	Field mustard	mitochondrion	62.36	57.81
KRH52366	Soybean	mitochondrion, nucleus	62.92	57.73
KRH61698	Soybean	mitochondrion, nucleus	62.36	57.51
OQU85888	Sorghum	mitochondrion	49.44	56.77
Zm00001d052026_P001	Maize	mitochondrion	48.88	56.49
PGSC0003DMT400067218	Potato	mitochondrion	61.8	56.12
TraesCS7D01G147200.1	Wheat	mitochondrion, nucleus	51.12	55.83
TraesCS7D01G147100.1	Wheat	mitochondrion, nucleus	51.12	55.49
GSMUA_Achr5P22840_001	Banana	mitochondrion, nucleus	50.0	55.28
TraesCS7B01G048100.1	Wheat	mitochondrion	50.0	54.94
TraesCS7A01G145800.1	Wheat	mitochondrion, nucleus	51.12	54.82
TraesCS6A01G360300.1	Wheat	mitochondrion	51.12	54.82
KRH15790	Soybean	nucleus	60.67	54.27
KRH05258	Soybean	nucleus	61.24	53.96
Solyc06g065820.2.1	Tomato	mitochondrion	61.8	53.92
TraesCS6D01G343800.1	Wheat	mitochondrion	50.56	52.94
TraesCS6B01G393200.1	Wheat	mitochondrion	50.56	52.94
Os02t0797100-00	Rice	mitochondrion	51.12	52.91
Zm00001d045120_P001	Maize	mitochondrion	48.88	51.48
Os06t0181700-01	Rice	mitochondrion	51.12	51.12
GSMUA_Achr10P...	Banana	mitochondrion	50.0	50.57
Zm00001d035835_P001	Maize	mitochondrion	47.75	49.13
EER87969	Sorghum	mitochondrion	48.88	48.07
KRH09737	Soybean	nucleus	41.57	42.05
KRH47461	Soybean	nucleus	42.13	39.68
GSMUA_Achr7P16060_001	Banana	mitochondrion	52.25	39.41
KRH44444	Soybean	nucleus	43.26	38.5
KRH52445	Soybean	nucleus	37.64	36.22
KRH61776	Soybean	nucleus	38.2	35.42
KRH05157	Soybean	nucleus	39.33	35.18
KRH54960	Soybean	nucleus	39.89	32.42
KRH62994	Soybean	nucleus	39.33	32.11
KRH20262	Soybean	nucleus	40.45	30.25
KRH03696	Soybean	nucleus	39.89	29.71
HORVU7Hr1G029870.1	Barley	mitochondrion	25.84	19.41
KRH53092	Soybean	nucleus	32.02	18.87
KRH18890	Soybean	nucleus	32.58	18.65
KRH62373	Soybean	nucleus	32.58	18.47
KRG97594	Soybean	nucleus	32.02	18.45
KRH16699	Soybean	nucleus	32.02	18.27
KRH31278	Soybean	nucleus	32.58	18.24
KRH43213	Soybean	nucleus	28.09	16.03
KRH59367	Soybean	nucleus	28.09	16.03
KRH77640	Soybean	nucleus	27.53	15.61
KRH27850	Soybean	nucleus	28.09	15.38
KRH34596	Soybean	nucleus	27.53	12.66
KRG92191	Soybean	nucleus	26.97	11.76
KRH25541	Soybean	nucleus	26.4	11.55
KRH55997	Soybean	nucleus	25.84	11.41
KRH22409	Soybean	nucleus	25.28	10.74
KRH26929	Soybean	nucleus	25.28	10.66

Protein Annotations

EntrezGene:100805499	MapMan:15.5.7.1	Gene3D:3.30.730.10	EMBL:ACUP02009105	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_15G004200	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	UniProt:I1MCB7	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KRH09667	ProteinID:KRH09667
ProteinID:KRH09667.1	PFAM:PF00847	PIRSF:PIRSF038123	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194
PANTHER:PTHR31194:SF4	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000233B48A	SEG:seg	:

Description

hypothetical protein

Coordinates

chr15:+:385421..386513

Molecular Weight (calculated)

20288.7 Da

IEP (calculated)

6.629

GRAVY (calculated)

-0.846

Length

178 amino acids

Sequence
(BLAST)

001: MARPQQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPKAR TNFPYNPNEP QSSSSKLLSA TLTAKLHKCH MASLSLQMSK
101: QKQSQTEPHQ GSSNDSGNSI AGTSSDNTQF RWPEEEGQVE LLEQQQQFQP VLQDDHIEQM IQELLDYGSM EISFVHSA

Best Arabidopsis Sequence Match ( AT5G25190.1 )
(BLAST)

001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAI PTSSSKLLSA TLTAKLHKCY MASLQMTKQT
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L

Arabidopsis Description

ERF003Ethylene-responsive transcription factor ERF003 [Source:UniProtKB/Swiss-Prot;Acc:Q94AW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.