Factsheet for Bra009824.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88163	Canola	mitochondrion	90.62	99.43
CDY65537	Canola	mitochondrion	85.42	95.35
Bra020490.1-P	Field mustard	mitochondrion	78.65	86.29
AT5G25190.1	Thale cress	mitochondrion	79.17	83.98
Bra036536.1-P	Field mustard	mitochondrion	78.12	83.8
CDY05373	Canola	mitochondrion	79.17	82.61
GSMUA_Achr7P19320_001	Banana	nucleus	50.52	63.4
VIT_04s0008g06000.t01	Wine grape	mitochondrion	61.46	63.1
KRH09667	Soybean	mitochondrion, nucleus	57.81	62.36
KRH47384	Soybean	mitochondrion, nucleus	61.46	60.82
KRH44522	Soybean	mitochondrion	60.94	60.0
OQU85888	Sorghum	mitochondrion	46.35	57.42
PGSC0003DMT400067218	Potato	mitochondrion	58.33	57.14
Zm00001d052026_P001	Maize	mitochondrion	45.31	56.49
GSMUA_Achr5P22840_001	Banana	mitochondrion, nucleus	46.88	55.9
Solyc06g065820.2.1	Tomato	mitochondrion	58.85	55.39
TraesCS6A01G360300.1	Wheat	mitochondrion	46.88	54.22
TraesCS7D01G147200.1	Wheat	mitochondrion, nucleus	45.83	53.99
TraesCS7B01G048100.1	Wheat	mitochondrion	45.31	53.7
TraesCS7D01G147100.1	Wheat	mitochondrion, nucleus	45.83	53.66
Os02t0797100-00	Rice	mitochondrion	47.92	53.49
TraesCS7A01G145800.1	Wheat	mitochondrion, nucleus	45.83	53.01
TraesCS6B01G393200.1	Wheat	mitochondrion	46.88	52.94
TraesCS6D01G343800.1	Wheat	mitochondrion	46.88	52.94
GSMUA_Achr10P...	Banana	mitochondrion	47.4	51.7
Zm00001d045120_P001	Maize	mitochondrion	44.79	50.89
Os06t0181700-01	Rice	mitochondrion	46.35	50.0
KRH23632	Soybean	nucleus	58.33	49.56
Zm00001d035835_P001	Maize	mitochondrion	44.27	49.13
EER87969	Sorghum	mitochondrion	44.27	46.96
GSMUA_Achr7P16060_001	Banana	mitochondrion	51.56	41.95
Bra026140.1-P	Field mustard	nucleus	39.58	38.38
Bra036543.1-P	Field mustard	nucleus	35.94	37.7
Bra016663.1-P	Field mustard	nucleus	39.06	37.5
Bra008985.1-P	Field mustard	nucleus	35.94	36.9
Bra026770.1-P	Field mustard	nucleus	28.65	32.16
Bra024357.1-P	Field mustard	mitochondrion	19.79	30.89
Bra009837.1-P	Field mustard	mitochondrion, nucleus	26.56	30.0
Bra031371.1-P	Field mustard	nucleus	28.12	20.77
Bra010657.1-P	Field mustard	nucleus	27.08	20.16
Bra017879.1-P	Field mustard	nucleus	26.56	19.62
Bra030255.1-P	Field mustard	plastid	23.96	19.49
HORVU7Hr1G029870.1	Barley	mitochondrion	23.96	19.41
Bra011833.1-P	Field mustard	nucleus	27.6	19.2
Bra031880.1-P	Field mustard	nucleus	27.08	18.77
Bra024358.1-P	Field mustard	nucleus	26.04	17.73
Bra008343.1-P	Field mustard	nucleus	28.12	17.36
Bra003659.1-P	Field mustard	nucleus	28.65	17.3
Bra024222.1-P	Field mustard	nucleus	20.31	17.11
Bra027697.1-P	Field mustard	nucleus	26.56	16.5
Bra015634.1-P	Field mustard	nucleus	28.12	16.46
Bra040381.1-P	Field mustard	nucleus	27.08	16.2
Bra027736.1-P	Field mustard	nucleus	25.52	16.07
Bra032724.1-P	Field mustard	nucleus	26.04	14.29
Bra031146.1-P	Field mustard	nucleus	22.92	14.15
Bra010383.1-P	Field mustard	nucleus	20.31	14.13
Bra026280.1-P	Field mustard	nucleus	20.31	13.31

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra009824
EnsemblPlants:Bra009824.1	EnsemblPlants:Bra009824.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:M4D026	PFAM:PF00847	PIRSF:PIRSF038123
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF4	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI000253F2DD	SEG:seg	:	:	:	:

Description

AT5G25190 (E=3e-036) | ethylene-responsive element-binding protein, putative

Coordinates

chrA06:-:17517717..17518415

Molecular Weight (calculated)

21835.9 Da

IEP (calculated)

9.183

GRAVY (calculated)

-0.710

Length

192 amino acids

Sequence
(BLAST)

001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAV PSSSSKLLSA TLTAKLHKCY MASLHLTKQT
101: QTQSQAQAQN PRLRSLSLPD TDSVMNMTAG GNHYDRGGGV TETMKEIKWE DGNANLQQSF KPLEEDHIEQ MIEELRHYGS IEFCSVLPTR SM

Best Arabidopsis Sequence Match ( AT5G25190.1 )
(BLAST)

001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAI PTSSSKLLSA TLTAKLHKCY MASLQMTKQT
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L

Arabidopsis Description

ERF003Ethylene-responsive transcription factor ERF003 [Source:UniProtKB/Swiss-Prot;Acc:Q94AW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.