Factsheet for Bra027736.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47850	Canola	nucleus	97.05	97.05
Bra027697.1-P	Field mustard	nucleus	80.98	79.94
AT1G64380.1	Thale cress	nucleus	81.97	74.63
PGSC0003DMT400031685	Potato	nucleus	48.52	50.34
Solyc08g082210.2.1	Tomato	nucleus	42.62	49.24
KRH77640	Soybean	nucleus	48.85	47.45
PGSC0003DMT400014953	Potato	nucleus	48.2	47.12
VIT_02s0025g01360.t01	Wine grape	nucleus	39.67	45.83
KRH27850	Soybean	nucleus	48.2	45.23
GSMUA_Achr5P09470_001	Banana	nucleus	37.05	45.2
Os05t0572000-00	Rice	nucleus	35.74	39.93
GSMUA_Achr1P27990_001	Banana	nucleus	31.8	39.11
Bra024357.1-P	Field mustard	mitochondrion	15.74	39.02
Zm00001d009622_P001	Maize	plastid	33.44	38.78
TraesCS1B01G441300.1	Wheat	plastid	35.41	38.3
TraesCS1A01G411100.1	Wheat	plastid	35.74	38.25
TraesCS1D01G418900.1	Wheat	plastid	35.08	37.81
Zm00001d039077_P001	Maize	plastid	35.08	37.28
EES19973	Sorghum	plastid	36.39	36.76
HORVU1Hr1G090250.1	Barley	plastid	35.08	36.15
Bra031371.1-P	Field mustard	nucleus	24.92	29.23
Bra010657.1-P	Field mustard	nucleus	23.93	28.29
Bra024358.1-P	Field mustard	nucleus	25.9	28.01
Bra017879.1-P	Field mustard	nucleus	23.61	27.69
Bra031880.1-P	Field mustard	nucleus	24.92	27.44
Bra020490.1-P	Field mustard	mitochondrion	15.74	27.43
Bra011833.1-P	Field mustard	nucleus	24.59	27.17
Bra030255.1-P	Field mustard	plastid	20.98	27.12
Bra036536.1-P	Field mustard	mitochondrion	15.74	26.82
Bra036543.1-P	Field mustard	nucleus	16.07	26.78
Bra026140.1-P	Field mustard	nucleus	17.38	26.77
Bra008985.1-P	Field mustard	nucleus	16.39	26.74
Bra016663.1-P	Field mustard	nucleus	17.38	26.5
Bra008343.1-P	Field mustard	nucleus	26.89	26.37
Bra015634.1-P	Field mustard	nucleus	27.54	25.61
Bra009824.1-P	Field mustard	mitochondrion	16.07	25.52
Bra003659.1-P	Field mustard	nucleus	26.23	25.16
Bra040381.1-P	Field mustard	nucleus	24.92	23.68
Bra032724.1-P	Field mustard	nucleus	26.89	23.43
Bra009837.1-P	Field mustard	mitochondrion, nucleus	12.79	22.94
Bra024222.1-P	Field mustard	nucleus	17.05	22.81
Bra026770.1-P	Field mustard	nucleus	11.8	21.05
Bra010383.1-P	Field mustard	nucleus	19.02	21.01
Bra026280.1-P	Field mustard	nucleus	19.67	20.48
Bra031146.1-P	Field mustard	nucleus	18.69	18.33

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra027736	EnsemblPlants:Bra027736.1
EnsemblPlants:Bra027736.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4EG23	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31657	PANTHER:PTHR31657:SF20	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000254228E	SEG:seg

Description

AT1G64380 (E=1e-038) | AP2 domain-containing transcription factor, putative

Coordinates

chrA09:-:6535841..6536758

Molecular Weight (calculated)

33177.9 Da

IEP (calculated)

9.427

GRAVY (calculated)

-0.452

Length

305 amino acids

Sequence
(BLAST)

001: MEEHNYHFQT NLSPKISEIR ASLSQIILAG GPNTLDSVFS FLATSSATTS LDTLNPPPPQ LGSSVYLHQR DLIESFHLQN RAISTPPPLF SSSFDHQSSP
101: AAAFAAALAA GRTAKKKKLY RGVRQRHWGK WAAGIRLPQN RMRVWLGTYE TAEAAAYAYD RAAYKLRGEY ARLNFPNIKD PSELLGLGDS SKLTALKNAV
201: DGKIQSICQR VRRERAKKSG KGSKDSSSSS PGSLSSPAAT ATAADSENSY WNSKNSSPAS VSISDEMPAT TTAAAEEDMM MDTEGFLLAR MPSFDPELIW
301: EVLAN

Best Arabidopsis Sequence Match ( AT1G64380.1 )
(BLAST)

001: MEESNDIFQN NFSPKISEIR ASLSQIILAG GPNTLDSIFS LLTPSSVESA TTSFNTHNPP PPPQLGSSVY LRQRDIIEKF HLQNRAISTP HPPLFSSTYD
101: HHQTSELMLQ AAAGSPAAAF AAALAAGRVT KKKKLYRGVR QRHWGKWVAE IRLPQNRMRV WLGTYDTAEA AAYAYDRAAY KLRGEYARLN FPNLKDPSEL
201: LGLGDSSKLI ALKNAVDGKI QSICQRVRKE RAKKSVKVSK NSSATADSSC LSSPEILSSS PVTTTTTAVT SEDSYWVSPM GLCNSENSSP VSVSVPSEVP
301: ATAEEEAMMG VDTDGFLLAR MPSFDPELIW EVLAN

Arabidopsis Description

ERF061Ethylene-responsive transcription factor ERF061 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7W2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.