Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400031685 | Potato | nucleus | 63.14 | 67.01 |
| VIT_02s0025g01360.t01 | Wine grape | nucleus | 48.08 | 56.82 |
| KRH77640 | Soybean | nucleus | 53.53 | 53.18 |
| PGSC0003DMT400039593 | Potato | nucleus | 11.86 | 51.39 |
| KRH27850 | Soybean | nucleus | 53.21 | 51.08 |
| Bra027736.1-P | Field mustard | nucleus | 47.12 | 48.2 |
| Bra027697.1-P | Field mustard | nucleus | 47.12 | 47.57 |
| AT1G64380.1 | Thale cress | nucleus | 49.36 | 45.97 |
| GSMUA_Achr5P09470_001 | Banana | nucleus | 36.22 | 45.2 |
| Os05t0572000-00 | Rice | nucleus | 35.9 | 41.03 |
| Zm00001d009622_P001 | Maize | plastid | 33.97 | 40.3 |
| CDY08372 | Canola | nucleus | 29.81 | 39.57 |
| GSMUA_Achr1P27990_001 | Banana | nucleus | 31.41 | 39.52 |
| TraesCS1A01G411100.1 | Wheat | plastid | 34.29 | 37.54 |
| Zm00001d039077_P001 | Maize | plastid | 34.29 | 37.28 |
| TraesCS1D01G418900.1 | Wheat | plastid | 33.33 | 36.75 |
| TraesCS1B01G441300.1 | Wheat | plastid | 33.01 | 36.52 |
| EES19973 | Sorghum | plastid | 35.26 | 36.42 |
| HORVU1Hr1G090250.1 | Barley | plastid | 33.33 | 35.14 |
| PGSC0003DMT400036634 | Potato | mitochondrion, nucleus | 14.74 | 28.93 |
| PGSC0003DMT400036817 | Potato | mitochondrion, nucleus | 14.74 | 28.93 |
| PGSC0003DMT400007494 | Potato | nucleus | 17.95 | 27.72 |
| PGSC0003DMT400080372 | Potato | nucleus | 21.79 | 26.36 |
| PGSC0003DMT400001703 | Potato | nucleus | 16.99 | 25.73 |
| PGSC0003DMT400022023 | Potato | nucleus | 27.88 | 25.66 |
| PGSC0003DMT400067218 | Potato | mitochondrion | 15.71 | 25.0 |
| PGSC0003DMT400077702 | Potato | nucleus | 16.03 | 24.75 |
| PGSC0003DMT400024508 | Potato | nucleus | 28.85 | 24.52 |
| PGSC0003DMT400073334 | Potato | mitochondrion | 14.1 | 24.18 |
| PGSC0003DMT400053152 | Potato | nucleus | 27.24 | 22.97 |
| PGSC0003DMT400047265 | Potato | nucleus | 21.15 | 16.97 |
| PGSC0003DMT400091991 | Potato | nucleus | 18.27 | 16.76 |
| PGSC0003DMT400039576 | Potato | nucleus | 18.59 | 16.43 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M1A562 |
| PFAM:PF00847 | EnsemblPlantsGene:PGSC0003DMG400005837 | PGSC:PGSC0003DMG400005837 | EnsemblPlants:PGSC0003DMT400014953 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31657 | PANTHER:PTHR31657:SF20 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000294C0F3 | SEG:seg |
Description
AP2/ERF domain-containing transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400005837]
Coordinates
chr8:-:5091058..5092562
Molecular Weight (calculated)
35239.3 Da
IEP (calculated)
7.429
GRAVY (calculated)
-0.604
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYTYDEAAQ IRSSLSQILL TSSTNTLDSI FFHCQEPKNQ MTTTSPVLEP LCSSVYLRQK DLLQNFWEQN RTNITIPTTS TQTPLQESLY SQRYVSPNKK
101: KLYRGVRQRH WGKWVAEIRL PQKRMRVWLG TYDNAEAAAY AYDRAAYKLR GEYARLNFPN LRDPSELGFG DSAKMNALKN SVDAKIQAIC QKVKRERAKK
201: GGKKIVESEK KVAKNVDLDS SSCSSSSLVD SESWSHSDVI SQSSSDDGFL NSEKSPCSVL GDCPMGPEND NCHVTSITHH FERSVLESEF EDYSLAAMPS
301: FDPELIWAVL AS
101: KLYRGVRQRH WGKWVAEIRL PQKRMRVWLG TYDNAEAAAY AYDRAAYKLR GEYARLNFPN LRDPSELGFG DSAKMNALKN SVDAKIQAIC QKVKRERAKK
201: GGKKIVESEK KVAKNVDLDS SSCSSSSLVD SESWSHSDVI SQSSSDDGFL NSEKSPCSVL GDCPMGPEND NCHVTSITHH FERSVLESEF EDYSLAAMPS
301: FDPELIWAVL AS
001: MEESNDIFQN NFSPKISEIR ASLSQIILAG GPNTLDSIFS LLTPSSVESA TTSFNTHNPP PPPQLGSSVY LRQRDIIEKF HLQNRAISTP HPPLFSSTYD
101: HHQTSELMLQ AAAGSPAAAF AAALAAGRVT KKKKLYRGVR QRHWGKWVAE IRLPQNRMRV WLGTYDTAEA AAYAYDRAAY KLRGEYARLN FPNLKDPSEL
201: LGLGDSSKLI ALKNAVDGKI QSICQRVRKE RAKKSVKVSK NSSATADSSC LSSPEILSSS PVTTTTTAVT SEDSYWVSPM GLCNSENSSP VSVSVPSEVP
301: ATAEEEAMMG VDTDGFLLAR MPSFDPELIW EVLAN
101: HHQTSELMLQ AAAGSPAAAF AAALAAGRVT KKKKLYRGVR QRHWGKWVAE IRLPQNRMRV WLGTYDTAEA AAYAYDRAAY KLRGEYARLN FPNLKDPSEL
201: LGLGDSSKLI ALKNAVDGKI QSICQRVRKE RAKKSVKVSK NSSATADSSC LSSPEILSSS PVTTTTTAVT SEDSYWVSPM GLCNSENSSP VSVSVPSEVP
301: ATAEEEAMMG VDTDGFLLAR MPSFDPELIW EVLAN
Arabidopsis Description
ERF061Ethylene-responsive transcription factor ERF061 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7W2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.