Factsheet for Bra027697.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46525	Canola	nucleus	87.7	94.76
Bra027736.1-P	Field mustard	nucleus	79.94	80.98
AT1G64380.1	Thale cress	nucleus	82.52	76.12
PGSC0003DMT400031685	Potato	nucleus	48.54	51.02
Solyc08g082210.2.1	Tomato	nucleus	42.39	49.62
VIT_02s0025g01360.t01	Wine grape	nucleus	40.78	47.73
GSMUA_Achr5P09470_001	Banana	nucleus	38.19	47.2
KRH77640	Soybean	nucleus	47.9	47.13
PGSC0003DMT400014953	Potato	nucleus	47.57	47.12
KRH27850	Soybean	nucleus	46.93	44.62
Os05t0572000-00	Rice	nucleus	35.28	39.93
GSMUA_Achr1P27990_001	Banana	nucleus	32.04	39.92
Zm00001d009622_P001	Maize	plastid	33.33	39.16
Zm00001d039077_P001	Maize	plastid	36.25	39.02
Bra024357.1-P	Field mustard	mitochondrion	15.21	38.21
TraesCS1B01G441300.1	Wheat	plastid	34.63	37.94
TraesCS1A01G411100.1	Wheat	plastid	34.95	37.89
TraesCS1D01G418900.1	Wheat	plastid	34.63	37.81
EES19973	Sorghum	plastid	36.89	37.75
HORVU1Hr1G090250.1	Barley	plastid	34.95	36.49
Bra031371.1-P	Field mustard	nucleus	25.57	30.38
Bra010657.1-P	Field mustard	nucleus	24.27	29.07
Bra020490.1-P	Field mustard	mitochondrion	16.18	28.57
Bra036536.1-P	Field mustard	mitochondrion	16.5	28.49
Bra017879.1-P	Field mustard	nucleus	23.95	28.46
Bra030255.1-P	Field mustard	plastid	21.68	28.39
Bra011833.1-P	Field mustard	nucleus	25.24	28.26
Bra024358.1-P	Field mustard	nucleus	25.57	28.01
Bra016663.1-P	Field mustard	nucleus	18.12	28.0
Bra008343.1-P	Field mustard	nucleus	28.16	27.97
Bra008985.1-P	Field mustard	nucleus	16.83	27.81
Bra026140.1-P	Field mustard	nucleus	17.8	27.78
Bra031880.1-P	Field mustard	nucleus	24.6	27.44
Bra036543.1-P	Field mustard	nucleus	16.18	27.32
Bra003659.1-P	Field mustard	nucleus	27.83	27.04
Bra015634.1-P	Field mustard	nucleus	28.48	26.83
Bra009824.1-P	Field mustard	mitochondrion	16.5	26.56
Bra040381.1-P	Field mustard	nucleus	25.89	24.92
Bra032724.1-P	Field mustard	nucleus	25.57	22.57
Bra024222.1-P	Field mustard	nucleus	16.18	21.93
Bra009837.1-P	Field mustard	mitochondrion, nucleus	11.97	21.76
Bra026770.1-P	Field mustard	nucleus	11.97	21.64
Bra010383.1-P	Field mustard	nucleus	17.8	19.93
Bra026280.1-P	Field mustard	nucleus	18.45	19.45
Bra031146.1-P	Field mustard	nucleus	17.8	17.68

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra027697	EnsemblPlants:Bra027697.1
EnsemblPlants:Bra027697.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4EFY4	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31657	PANTHER:PTHR31657:SF20	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000254237A	SEG:seg

Description

AT1G64380 (E=6e-063) | AP2 domain-containing transcription factor, putative

Coordinates

chrA09:+:6868365..6869294

Molecular Weight (calculated)

33934.9 Da

IEP (calculated)

8.836

GRAVY (calculated)

-0.462

Length

309 amino acids

Sequence
(BLAST)

001: MEENNDVFQT KFSPKISEIR ASLSQIILAG GPNTLDSIFS LLTPSSRESS TTSLDTLNPP PQQLGSSVYL QQRDLIERLH LQNRAVSTPP PLFSSSAAFA
101: ASLAAGTAKR KKLYRGVRQR HWGKWVAEIR LPQNRMRVWL GTYETAEAAA YAYDRAAYKL RGEYARLNFP NLKDPSELLG LGDSSKLIAL KSAVDGKIQT
201: ICQRVRRERA KKSGKGSKDS STATADSSYS SSSEILSSPA EAVTATVVSS EDSYRSSQMG LWNSEKSYPA TTTSTAEEED TMMGVDTDGF LLARMPSFDP
301: ELIWEVLAN

Best Arabidopsis Sequence Match ( AT1G64380.1 )
(BLAST)

001: MEESNDIFQN NFSPKISEIR ASLSQIILAG GPNTLDSIFS LLTPSSVESA TTSFNTHNPP PPPQLGSSVY LRQRDIIEKF HLQNRAISTP HPPLFSSTYD
101: HHQTSELMLQ AAAGSPAAAF AAALAAGRVT KKKKLYRGVR QRHWGKWVAE IRLPQNRMRV WLGTYDTAEA AAYAYDRAAY KLRGEYARLN FPNLKDPSEL
201: LGLGDSSKLI ALKNAVDGKI QSICQRVRKE RAKKSVKVSK NSSATADSSC LSSPEILSSS PVTTTTTAVT SEDSYWVSPM GLCNSENSSP VSVSVPSEVP
301: ATAEEEAMMG VDTDGFLLAR MPSFDPELIW EVLAN

Arabidopsis Description

ERF061Ethylene-responsive transcription factor ERF061 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7W2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.