Factsheet for Bra020490.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05479	Canola	mitochondrion	97.14	91.89
Bra036536.1-P	Field mustard	mitochondrion	84.0	82.12
AT5G25190.1	Thale cress	mitochondrion	84.0	81.22
Bra009824.1-P	Field mustard	mitochondrion	86.29	78.65
GSMUA_Achr7P19320_001	Banana	nucleus	56.0	64.05
VIT_04s0008g06000.t01	Wine grape	mitochondrion	66.86	62.57
KRH09667	Soybean	mitochondrion, nucleus	63.43	62.36
KRH47384	Soybean	mitochondrion, nucleus	66.29	59.79
KRH44522	Soybean	mitochondrion	65.71	58.97
PGSC0003DMT400067218	Potato	mitochondrion	65.14	58.16
OQU85888	Sorghum	mitochondrion	51.43	58.06
Zm00001d052026_P001	Maize	mitochondrion	50.29	57.14
GSMUA_Achr5P22840_001	Banana	mitochondrion, nucleus	52.0	56.52
Solyc06g065820.2.1	Tomato	mitochondrion	65.71	56.37
TraesCS7D01G147200.1	Wheat	mitochondrion, nucleus	50.86	54.6
TraesCS7B01G048100.1	Wheat	mitochondrion	50.29	54.32
TraesCS7D01G147100.1	Wheat	mitochondrion, nucleus	50.86	54.27
TraesCS6A01G360300.1	Wheat	mitochondrion	51.43	54.22
TraesCS7A01G145800.1	Wheat	mitochondrion, nucleus	50.86	53.61
Os02t0797100-00	Rice	mitochondrion	52.57	53.49
TraesCS6D01G343800.1	Wheat	mitochondrion	51.43	52.94
TraesCS6B01G393200.1	Wheat	mitochondrion	51.43	52.94
GSMUA_Achr10P...	Banana	mitochondrion	52.57	52.27
Zm00001d045120_P001	Maize	mitochondrion	48.57	50.3
Os06t0181700-01	Rice	mitochondrion	50.86	50.0
KRH23632	Soybean	nucleus	64.0	49.56
Zm00001d035835_P001	Maize	mitochondrion	48.57	49.13
EER87969	Sorghum	mitochondrion	48.57	46.96
GSMUA_Achr7P16060_001	Banana	mitochondrion	57.14	42.37
Bra026140.1-P	Field mustard	nucleus	42.29	37.37
Bra036543.1-P	Field mustard	nucleus	38.86	37.16
Bra008985.1-P	Field mustard	nucleus	39.43	36.9
Bra016663.1-P	Field mustard	nucleus	41.71	36.5
Bra026770.1-P	Field mustard	nucleus	30.29	30.99
Bra024357.1-P	Field mustard	mitochondrion	21.71	30.89
Bra009837.1-P	Field mustard	mitochondrion, nucleus	29.14	30.0
Bra031371.1-P	Field mustard	nucleus	29.71	20.0
Bra017879.1-P	Field mustard	nucleus	29.14	19.62
HORVU7Hr1G029870.1	Barley	mitochondrion	26.29	19.41
Bra010657.1-P	Field mustard	nucleus	28.57	19.38
Bra030255.1-P	Field mustard	plastid	25.71	19.07
Bra031880.1-P	Field mustard	nucleus	29.71	18.77
Bra011833.1-P	Field mustard	nucleus	29.14	18.48
Bra024358.1-P	Field mustard	nucleus	28.57	17.73
Bra024222.1-P	Field mustard	nucleus	22.29	17.11
Bra008343.1-P	Field mustard	nucleus	30.29	17.04
Bra003659.1-P	Field mustard	nucleus	30.86	16.98
Bra027697.1-P	Field mustard	nucleus	28.57	16.18
Bra015634.1-P	Field mustard	nucleus	30.29	16.16
Bra027736.1-P	Field mustard	nucleus	27.43	15.74
Bra040381.1-P	Field mustard	nucleus	28.57	15.58
Bra031146.1-P	Field mustard	nucleus	25.14	14.15
Bra010383.1-P	Field mustard	nucleus	22.29	14.13
Bra032724.1-P	Field mustard	nucleus	28.0	14.0
Bra026280.1-P	Field mustard	nucleus	22.29	13.31

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra020490
EnsemblPlants:Bra020490.1	EnsemblPlants:Bra020490.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:M4DVE6	PFAM:PF00847	PIRSF:PIRSF038123
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF4	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI000254703E	SEG:seg	:	:	:	:

Description

AT5G25190 (E=5e-072) | ethylene-responsive element-binding protein, putative

Coordinates

chrA02:+:25051637..25052290

Molecular Weight (calculated)

19815.5 Da

IEP (calculated)

8.633

GRAVY (calculated)

-0.658

Length

175 amino acids

Sequence
(BLAST)

001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAI PSPSSKLLSA TLTAKLHKCY MASLQMTKQS
101: QTQTQNTHSV KNVAFDGGNQ YNTGGGVTEM KCEDGNANLK QNFRPLEEDH IEQMIEELLH YGSIEFCSVL PSQSL

Best Arabidopsis Sequence Match ( AT5G25190.1 )
(BLAST)

001: MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR TNFPYNPNAI PTSSSKLLSA TLTAKLHKCY MASLQMTKQT
101: QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L

Arabidopsis Description

ERF003Ethylene-responsive transcription factor ERF003 [Source:UniProtKB/Swiss-Prot;Acc:Q94AW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.