Factsheet for Bra040381.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48227	Canola	nucleus	100.0	100.0
CDX73367	Canola	nucleus	95.02	95.02
AT1G36060.1	Thale cress	nucleus	76.64	78.34
Bra031371.1-P	Field mustard	nucleus	39.25	48.46
Bra024357.1-P	Field mustard	mitochondrion	18.38	47.97
TraesCS7D01G469200.1	Wheat	nucleus	24.92	47.9
GSMUA_Achr3P04360_001	Banana	nucleus	35.51	45.6
Bra003659.1-P	Field mustard	nucleus	42.37	42.77
GSMUA_Achr6P10440_001	Banana	nucleus	34.27	42.15
Bra008343.1-P	Field mustard	nucleus	40.81	42.12
GSMUA_Achr10P...	Banana	nucleus	36.14	41.58
Bra015634.1-P	Field mustard	nucleus	40.81	39.94
Bra017879.1-P	Field mustard	nucleus	32.09	39.62
Zm00001d052229_P001	Maize	nucleus	38.94	39.56
Os08t0408500-01	Rice	nucleus	34.27	39.29
Bra010657.1-P	Field mustard	nucleus	31.46	39.15
TraesCS4B01G268100.1	Wheat	nucleus	32.09	39.02
Zm00001d032295_P001	Maize	nucleus	31.78	38.93
EES13814	Sorghum	nucleus	32.71	38.75
Os03t0191900-01	Rice	nucleus	35.83	38.72
TraesCS6A01G301900.1	Wheat	nucleus	39.56	38.72
HORVU5Hr1G058270.1	Barley	nucleus	33.96	38.52
Zm00001d020267_P001	Maize	nucleus	35.51	38.51
GSMUA_Achr3P01650_001	Banana	nucleus	39.56	38.48
TraesCS6B01G331000.1	Wheat	nucleus	39.88	38.44
TraesCS4D01G267500.1	Wheat	nucleus	33.64	38.43
TraesCS5D01G200900.2	Wheat	nucleus	33.96	38.38
HORVU6Hr1G074970.1	Barley	nucleus	39.25	38.18
Os02t0752800-01	Rice	nucleus	40.19	38.17
TraesCS6D01G281200.1	Wheat	nucleus	39.56	38.14
Zm00001d018081_P001	Maize	nucleus	40.5	38.12
EES07235	Sorghum	nucleus	39.25	38.07
KXG35507	Sorghum	nucleus	35.83	37.83
TraesCS4A01G035400.2	Wheat	nucleus	33.02	37.72
Zm00001d048208_P001	Maize	nucleus	34.89	37.71
Bra011833.1-P	Field mustard	nucleus	32.4	37.68
TraesCS5B01G193200.1	Wheat	nucleus	33.33	37.68
Zm00001d028017_P001	Maize	nucleus	34.58	37.0
Bra024358.1-P	Field mustard	nucleus	32.09	36.52
HORVU6Hr1G060220.1	Barley	nucleus	28.04	36.44
Bra030255.1-P	Field mustard	plastid	26.48	36.02
EER92713	Sorghum	nucleus	34.58	35.02
Bra031880.1-P	Field mustard	nucleus	29.91	34.66
Zm00001d030513_P001	Maize	mitochondrion	29.59	34.55
HORVU4Hr1G071890.3	Barley	nucleus	29.28	34.06
TraesCS7D01G182700.1	Wheat	nucleus, plastid	38.32	33.61
TraesCS7A01G180900.1	Wheat	nucleus, plastid	37.69	33.43
TraesCS7B01G085900.1	Wheat	nucleus, plastid	38.32	33.42
Zm00001d044857_P001	Maize	nucleus	36.14	33.24
GSMUA_Achr9P12950_001	Banana	nucleus	34.58	32.74
EER89448	Sorghum	nucleus	37.38	32.7
HORVU7Hr1G037180.1	Barley	nucleus, plastid	37.69	32.61
Bra020490.1-P	Field mustard	mitochondrion	15.58	28.57
Bra036536.1-P	Field mustard	mitochondrion	15.89	28.49
Bra024222.1-P	Field mustard	nucleus	19.31	27.19
Bra009824.1-P	Field mustard	mitochondrion	16.2	27.08
Bra036543.1-P	Field mustard	nucleus	15.26	26.78
Os10t0371100-00	Rice	nucleus	29.28	26.11
Bra027697.1-P	Field mustard	nucleus	24.92	25.89
Bra026140.1-P	Field mustard	nucleus	15.89	25.76
Bra010383.1-P	Field mustard	nucleus	21.81	25.36
Bra008985.1-P	Field mustard	nucleus	14.64	25.13
Bra016663.1-P	Field mustard	nucleus	15.58	25.0
Bra027736.1-P	Field mustard	nucleus	23.68	24.92
Bra026280.1-P	Field mustard	nucleus	21.81	23.89
Bra031146.1-P	Field mustard	nucleus	22.12	22.83
Bra032724.1-P	Field mustard	nucleus	24.3	22.29
Bra026770.1-P	Field mustard	nucleus	10.9	20.47
Bra009837.1-P	Field mustard	mitochondrion, nucleus	10.59	20.0

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra040381	EnsemblPlants:Bra040381.1
EnsemblPlants:Bra040381.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009415
GO:GO:0009628	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:M4FH03	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31657	PANTHER:PTHR31657:SF9	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI000253EC90	SEG:seg	:	:	:	:

Description

AT1G36060 (E=2e-102) | AP2 domain-containing transcription factor, putative

Coordinates

chrScaffold000201:-:11643..12608

Molecular Weight (calculated)

35790.9 Da

IEP (calculated)

5.901

GRAVY (calculated)

-0.780

Length

321 amino acids

Sequence
(BLAST)

001: MADFFSSSHG GELMEALQPF YKNASTSASD SAFVSSNAAF ASTPNDPFSF SYYNYQPQNI SSFSTTHSDY GSFPDIYPGS MTYPSSFPSN LQKQPDQNYQ
101: AQFHYQNDST YTHQDNHYTL NFVDPNNSDF LTQPDPVPSS GSVPKPSKLY RGVRQRHWGK WVAEIRLPRN RTRLWLGTFD TAEEAALAYD RAAFKLRGDS
201: ARLNFPALRY QTGSSPSDIG EYYGPIQAAV DAKLEAIFAE PKNQPGKKER TSRNRAKATP SSIDHSTPQQ QSRPGESDGS GSPPSDMKAL EMCVETPIPW
301: NDNFILGKCP SYEIDWASIL S

Best Arabidopsis Sequence Match ( AT1G36060.1 )
(BLAST)

001: MADLFGGGHG GELMEALQPF YKSASTSASN PAFASSNDAF ASAPNDLFSS SSYYNPHASL FPSHSTTSYP DIYSGSMTYP SSFGSDLQQP ENYQSQFHYQ
101: NTITYTHQDN NTCMLNFIEP SQPGFMTQPG PSSGSVSKPA KLYRGVRQRH WGKWVAEIRL PRNRTRLWLG TFDTAEEAAL AYDRAAFKLR GDSARLNFPA
201: LRYQTGSSPS DTGEYGPIQA AVDAKLEAIL AEPKNQPGKT ERTSRKRAKA AASSAEQPSA PQQHSGSGES DGSGSPTSDV MVQEMCQEPE MPWNENFMLG
301: KCPSYEIDWA SILS

Arabidopsis Description

ERF055Ethylene-responsive transcription factor ERF055 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKW5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.